| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0422 |
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| Symbol | |
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| ID | 5537884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 534421 |
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| End bp | 535755 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640892584 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001430571 |
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| Protein GI | 156740442 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.183813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGACC AAACGGCGCA GCCAGCCGTT ATACGAGGGA GCGCCAATCA AACGCGCGCG
TGCAGAGAAG AAAGGGTAAT GTCGGCGATG ACCAGAGCGA TTCGTCTTAT TGTGATCACA
TCACCCGATC AACTCGATCA GGAGTGGATC AATCGTCTGG CGCGCGAGGC GGAGATTGAG
CATCTTGATC GCGTGGGCAG TGTGGCTGCC GGCGTCCTTC TTGCCCGGCA GAGCCGTCCC
GATCTAGTCA TTGTGGATCG TGACGTCGAT CAGGTTGAAG CGGCGATCCG GCAAATCTTC
ACCCATGTTC CTGCCACGCA CTGCATTGCT GTCACTCCAT CGGCAGATGT GCCCACGTTG
CGGCGATTGG TGATGGCCGG TGCGCGTGAT GTCATCAGTC GTCCGATTCA CCATGCTGAC
ATCATGAACA GCATCCGTTC GGTGGTAACA GCGGAACGTA ATCGCGCCGT TCGCGCCGCC
TCGACAGGTG ATCGGCAAGC AGGGCGGTTG GTGGTTGTCG TGGCGCCAAA AGGCGGAGTT
GGCGCCACGA CCATCGCCAC CAATCTGGCG GTTGCGCTGC GCCAGGTGAC GAACACCAGC
GTTGCGCTCG CCGACATAGG GTTGCAGTTT GGCGATGTCG GTGTTCAGTT GAATATCTGG
TCGCGCCACA CCCTGCACGA TCTGGTACTG CATGCTGGCG AGCTCGATGA TACGCTCTTC
GAGAAAGTGC TACAGACACA CAGTTCCGGC GTCAAGGTAT TGCTGGCGCC GCACGAACTT
GAAGCAGCCG GCGACATCTC AGGCGAGGCG ATGATTGCGG TGTTGCAGGG TCTGCTGGGG
CGTCACACCT ATGTGGTATG CGATACCTGG TCATTCCTCG ATGAAGTCAC CGAAACCCTG
CTCCAGAGAG CAGACGATGT GCTGGTCGTC ACCACGCCGG AAGTTCCGGC GTTGCGCAAT
ACGAAGGGCT TTCTGGAGTA TCTCACGCGC AATGAACTGA CGCGGGGACG GATCACGCTG
GTGCTCAACC GCTTCCCAAG CGTTAACGGC ATTGCGTTGC ACGATGTGCA AAAGCACCTG
CGCTACCCGG TCGGCGCCAA CATTCCGAGT GAAGGACAAC CGATCACGCA CAGCATCAAC
CGCGGCGTGC CAATTGTCAT GGCGCAGCCG CACAGTTGGG CAAGCCAGAG TCTGCTGCGC
CTGGCGGCGT ATGTGGCCGG CGACAGCGCA AACCTGATTT CACTCCAGCA TTCGGGCGAA
AAGAAATCCG GGAAGAACGC TTTGCCGGGT ATGAAGGGGC GACGCGGCTT GTTGAGCCTG
ATGCGCGGGA CGTAG
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| Protein sequence | MRDQTAQPAV IRGSANQTRA CREERVMSAM TRAIRLIVIT SPDQLDQEWI NRLAREAEIE
HLDRVGSVAA GVLLARQSRP DLVIVDRDVD QVEAAIRQIF THVPATHCIA VTPSADVPTL
RRLVMAGARD VISRPIHHAD IMNSIRSVVT AERNRAVRAA STGDRQAGRL VVVVAPKGGV
GATTIATNLA VALRQVTNTS VALADIGLQF GDVGVQLNIW SRHTLHDLVL HAGELDDTLF
EKVLQTHSSG VKVLLAPHEL EAAGDISGEA MIAVLQGLLG RHTYVVCDTW SFLDEVTETL
LQRADDVLVV TTPEVPALRN TKGFLEYLTR NELTRGRITL VLNRFPSVNG IALHDVQKHL
RYPVGANIPS EGQPITHSIN RGVPIVMAQP HSWASQSLLR LAAYVAGDSA NLISLQHSGE
KKSGKNALPG MKGRRGLLSL MRGT
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