Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0396 |
Symbol | |
ID | 5537858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 500682 |
End bp | 501353 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640892559 |
Product | hypothetical protein |
Protein accession | YP_001430546 |
Protein GI | 156740417 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0267172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAC AAGGTTGGCA AGAGTTTCTT TCCGCTGAAG GAATAGACGA TTGGGTCGTG CTCCACGGAG GAGCGACGGC TGTCTTTCGT GTCGGGTCCC TGAGCGAAGC CGTGCGGTTA GCCGAAGCAA TCGCAGGGAT TACCGGTCTT GAGGATTCGG GGGTCGTGAT GACGATAGCG AATGACCATC TCACTGTTCG GCTGACGCGC GATATCTGGC GCCTCGAGCC GCGACACATT GAGTTGGCGC GGGCCATCTC TGCTATCGCG CAGGAGCATC ATGTGCCCGC AGATCGTGCC GCTGTTCAGG AGGTGCAGGT TGCAATCGCG GCGAAGCGCG ATGAGATAGA TGTCAACTTC TGGCGCGCCG TGCTGGGCTA CGTGCCGGCG GCTGACGACA ATGCGGTAGA CCCCCTTGGA CATGGATCGA CCGTCTGGAT GCAGGAGCTC GACGAGAGCA AGCCCTTGCG TCACGCGATG CACATCGATG TGTCGGTTGC GCGTGAGCAG GCCATGGTAC GACTGCAAGC AGCGCTTGCA GCGGGTGGAC GCATTGTTGA CGACTCTCAT GCGCCCTCGC ACTGGACGCT CGCCGACCGC GCGGGCAACC GCGTCTGTAT CGCTGCGTGG CCTGATGGGT CCACCCGGAG ACTATCGAGC GGCTCCGAAT AG
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Protein sequence | MSEQGWQEFL SAEGIDDWVV LHGGATAVFR VGSLSEAVRL AEAIAGITGL EDSGVVMTIA NDHLTVRLTR DIWRLEPRHI ELARAISAIA QEHHVPADRA AVQEVQVAIA AKRDEIDVNF WRAVLGYVPA ADDNAVDPLG HGSTVWMQEL DESKPLRHAM HIDVSVAREQ AMVRLQAALA AGGRIVDDSH APSHWTLADR AGNRVCIAAW PDGSTRRLSS GSE
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