Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0394 |
Symbol | |
ID | 5537856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 498303 |
End bp | 499589 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640892557 |
Product | amine oxidase |
Protein accession | YP_001430544 |
Protein GI | 156740415 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0586189 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTGC TGATCATCGG CGCGGGTCTG GCCGGGCTGA CCTGCGGGCG CATTCTCGAT TCACTCGGTG TGCGCGTCAC TCTTGTGGAA GCGAGCGACG GCATCGGCGG GCGTGTGCGC TCCGATTACG CCGACGGGTT CACGTTCGAC CGCGGGTTTC AGGTGTTGTT CGAGGCGTAT CCGGCGGCGC GCCGTCACCT CGATCTCGAC GCGCTGCACC TGCGGCGTTT CGATCCCGGA GCGATCATCT GCCTTGCGGG GAAGCGCTTC GTTCTGACCG ATCCGCTCCG CGATCAGGCA GCGGCGCTCG ATGCCGCGCT CACGCCGATT ATTCCGCCTC TTGACAAATT GCGGGTGTTG CTGCTCGCGC AGCGCCTGCG TCGTCAGTTG ATCGACGAGG TGCTGGCGGG CGACGACGAA ACAACGCTGG CGTATCTCCG CCGCTCCGGG TTCAGCGAGC AGACGATCAA TCACTTCTTT CGACCGTTCT ACGGCGGGAT TTTCCTTGAT CGCAGCCTGC GCACCAGCGC CAAGTGCTTT CGCTTCGACT TCAAGATGCT CAGCGAGGGC GCTGCGGCGC TTCCGGCGCA CGGCATGGGC GCGATTGCCG GTCAACTCGG CGATGCGCTC CTGGAGCGCG GTCTGATCCG ACTGCATACA CCGGTTGCCG AACTCATCAC CAACAATGGA CGGGTGACCG GCGCGCGGTT GGCGTCTGGA GAAGAACTGT TTGCCGACGC GGTTGTTGTG GCGACTCCCG CCCCCGAAGC GGCGCGTTTG AGCAGTCTGC CGATGCCACA GGGCGCATTG CAGACGATCA CGCTCTACTT CGGCGGAAGC CAACCGGTTT ATCGCGGGCG CAAGATCGCA CTGAACGCCG CTCCCGATGC GCTGATCAAC AATGCGCAGA TGATCAGCAA TGTCGCGCCG GAGTATGCGC CGACAGGGCG CCATCTGCTC AGTGCGACGG TGCTCGGCGC CAGCCCGTTG AGCGATGATG ATCTCTTCCG CGCCGCGCTC GCCGATCTGC GTCGCATGTT TGCCGGCGAC GCCGACGCGC TGGCGGCGCT CGAAGGGTAT CAACCATTGC GCGTGTACCG CGTTGCTTAC GCACAGTTCC CGCAGGCGCC GGGCATCCAT CCATTGCTGC CCGACAATCG CAGCGGACGA CCGGGGCTGT ATTTCGCCGG CGAGTTTACC GAAGCCAGCA GCCTGAATGC TGCCATGATC AGTGGTGAAA AGTGCGCAGC GGCAGTGATA GAGGAGCGAC AGGCATCCCG TTTCTAG
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Protein sequence | MHVLIIGAGL AGLTCGRILD SLGVRVTLVE ASDGIGGRVR SDYADGFTFD RGFQVLFEAY PAARRHLDLD ALHLRRFDPG AIICLAGKRF VLTDPLRDQA AALDAALTPI IPPLDKLRVL LLAQRLRRQL IDEVLAGDDE TTLAYLRRSG FSEQTINHFF RPFYGGIFLD RSLRTSAKCF RFDFKMLSEG AAALPAHGMG AIAGQLGDAL LERGLIRLHT PVAELITNNG RVTGARLASG EELFADAVVV ATPAPEAARL SSLPMPQGAL QTITLYFGGS QPVYRGRKIA LNAAPDALIN NAQMISNVAP EYAPTGRHLL SATVLGASPL SDDDLFRAAL ADLRRMFAGD ADALAALEGY QPLRVYRVAY AQFPQAPGIH PLLPDNRSGR PGLYFAGEFT EASSLNAAMI SGEKCAAAVI EERQASRF
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