Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0388 |
Symbol | |
ID | 5537850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 487926 |
End bp | 488642 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640892551 |
Product | nicotinamidase-like amidase |
Protein accession | YP_001430538 |
Protein GI | 156740409 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.328813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCCC GGATAAACCT CGCTGATCAC GCGCGTCCGT TTCTGACCTA CCTCGATGAG TGGTTCAGTT CGTTGCAGGA TGTGCCACTG GCGGAGGTCG TTGCCGGTGA GCCGGAACGG GTTGCGGTGC TATCGATTGA TGTCATCAAC GGCTTCTGCA AGAGTGGTCC GCTGGCGAGT GATCGCGTCG GGCGGATTGT GCGCCCGGTC GCCGATCTGT TCGAGCGCGC CTATGCGCTG GGGGTGCGCA ACTTTGCGTT GACCCAGGAC GCACACGATC CGCAGACGCC AGAATTCGAG GCGTATCCGC CGCACTGCAT CGCCGGCAGC GCCGAGAGCG CAGCCGTTGA GGAATTGACA TCGCTGCCGT TCTTCGATGA GATTGCTGTT TTCCCGAAGA ACTCCATCAG TTCGATGATC GGCACCGGTC TGAGCGCGTG GATCGGTGCG CGCCCGCAGG TGGAGCGTTT TATCGTCGTG GGTGATTGTA CCGATCTCTG CACCTATCAG GGGGCGATGC ACCTGCGCCT GGAAGCGAAT GCCTTCGGCA TCCGGCGCCG CGTGATTGTG CCCGCCAATG CGGTCGATAC GTTCGATACG CCAGTGTCGG CGGCGCGGGA GCTGCACATC AAAGCGCACG ACGGCGACCT GCACCACGTG CTGTTCCTCC ATCATATGGC GCTGAACGGT ATCGAGGTCG TGCGTGCGCT GGTGTAA
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Protein sequence | MPARINLADH ARPFLTYLDE WFSSLQDVPL AEVVAGEPER VAVLSIDVIN GFCKSGPLAS DRVGRIVRPV ADLFERAYAL GVRNFALTQD AHDPQTPEFE AYPPHCIAGS AESAAVEELT SLPFFDEIAV FPKNSISSMI GTGLSAWIGA RPQVERFIVV GDCTDLCTYQ GAMHLRLEAN AFGIRRRVIV PANAVDTFDT PVSAARELHI KAHDGDLHHV LFLHHMALNG IEVVRALV
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