Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0340 |
Symbol | |
ID | 5537802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 423169 |
End bp | 424647 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640892503 |
Product | hypothetical protein |
Protein accession | YP_001430490 |
Protein GI | 156740361 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00130161 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTATC TTTATCTCCG TCTTGCCCTG ATCGTGCTGT TGCTCGCGGC AGGCGCGAGC AGCGCGGCAG CGGCGCCCGC CGCCGAGGAA GGAAGTACGA CCGCCGTTTT CTTTCGGGAA ACGCAGAACT GGATTGCACC GCCGTTCTAT CAGTTCTGGA GCAAAAACGG CGGGTTGCCG ATCTTTGGCT ACCCGCTGGC GCCGACCGAT TTGATGACTA GCCCGGACGA CGGGAATACC TATGCCACCC AAATCTTTGA GCGCAACCGG CTTGAGTACC ATCCTGAAAA TCCTGAGCCA TACCGGGTGC AACTTGGCCG CCTGGGCGTT GAGGTGCTGC AAAAGCAGGG GCGCAACTGG CAGGATTTTC CCAAGGGTAC GCCAAAGCGC GGATGCGACT TCTTTCCTGA AACCGGGCAT ACCCTCTGTG AGCCGTTCCG CAGTTACTGG CGACGCTATG GGTTAGACCT GGGCTTTCGC GGCGTGACGC GCGCCGAGTC AATCGCCCTG TTCGGTCTGC CGATCTCTGA GCCGATGATG GAGACTAACG CCGATGGTGC GACGGTGCTG ACGCAGTGGT TCGAACGCGC ACGCTTCGAA TATCATCCCA ATAACCCGCC GCAGTATCGC GTCTTGCTCG GACTCCTCGG CAAGGAACTC TATGGACCCT ATCGTCCCGG CGTGGCAAGC GTGAGCGGCA GGGTCGTGGA GCGCGGGATG CCGTTCTGGG ATGCGGTCAG CAATAGCGGT ATGCAGATCA AGCAGGCGTC TGTCGGAATT GAGGGACCGT ACTATCCCGA AGATCATCCG CTCAGCGGCG TGACGGAAGT GGTCATGACC TCGCAAGGGG AGATTTCCGT TTCGACCGAA GGATGGTTTA CAACGCTCGT CGATATTCAA CCCGATAACT CGTTCGCATT CAGCGACTTT ATTCCCACTT TGCCGGGCGC TTTCATGATG CTGGGGCCGG GAAGGATCGA TGGCGTCTGC GCTGACGGAA AGGAAGCCGA TTTCTTGTCG TATGGGTCAG TACTGTTTGG GTCAGGCCAG GATTTGGATT TTGCTCTGGA AGGCGGTCAG GCAGCAAATT TTGGTGACTT TCGGGTGAAT GTCATCTGTC TCTCCCCGCC CGAGCCCGAC GCGCGCTATC ACGACGCGGC GTTCGCCGCC GTGCAGTGCG CCGCCGGACG TCCCTTGACG CGCGACCCGG AGTTTGACGC CTTCGCCGTC GAAGCCCAGC GCGCACATAG AAATGAGCGC GTCGAGGCGA TGGTGCGCGA ACACCCTCGA ATACGCGGCA TCACTTTTCT TGGCGTCACG TTCGACGGAG CGCCGTCGTC CGACCCGTGC ATCTTCGGCG GGAAGAACTT TCGCGACATT CGCCTCCTGT TTGAACAGGC GACGACGATC GGCGTCGCGG TCTTCCCGTC GTCATCCGCC AACTATCCCG TCGGCACGCT GGTCATCGTT CGAGACTGA
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Protein sequence | MHYLYLRLAL IVLLLAAGAS SAAAAPAAEE GSTTAVFFRE TQNWIAPPFY QFWSKNGGLP IFGYPLAPTD LMTSPDDGNT YATQIFERNR LEYHPENPEP YRVQLGRLGV EVLQKQGRNW QDFPKGTPKR GCDFFPETGH TLCEPFRSYW RRYGLDLGFR GVTRAESIAL FGLPISEPMM ETNADGATVL TQWFERARFE YHPNNPPQYR VLLGLLGKEL YGPYRPGVAS VSGRVVERGM PFWDAVSNSG MQIKQASVGI EGPYYPEDHP LSGVTEVVMT SQGEISVSTE GWFTTLVDIQ PDNSFAFSDF IPTLPGAFMM LGPGRIDGVC ADGKEADFLS YGSVLFGSGQ DLDFALEGGQ AANFGDFRVN VICLSPPEPD ARYHDAAFAA VQCAAGRPLT RDPEFDAFAV EAQRAHRNER VEAMVREHPR IRGITFLGVT FDGAPSSDPC IFGGKNFRDI RLLFEQATTI GVAVFPSSSA NYPVGTLVIV RD
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