| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0023 |
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| Symbol | |
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| ID | 5537480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 28504 |
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| End bp | 30525 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892188 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_001430180 |
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| Protein GI | 156740051 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component
[COG4651] Kef-type K+ transport system, predicted NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000486087 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGGATAG CAGCAGACAT TGCCATTATT GTCGTTGCAG CGCTCATTGG CGGATTTGTC
GCGCAGCGCT TTGGCCAACC GCTTCTTCTG GGATACATTC TGGCCGGCGT GGTCGTCGGT
CCCCATACCG GTGGGATTAC CGTCAGCAAC ATTCATGACA TCGAACTGCT CGCCGAAATT
GGGGTGGCGC TGCTCCTCTT TGCACTCGGG CTCGAATTCA ATCTTGGTCG TATGGGGAAG
GTGCGCACTA TTGCGCTGGC AGGCACGACT ATTCAAATTC TGGTGACCAT GGCGTTCGGC
TTTGGCATTG GTCGTATGCT TGGCTGGCCC GAGTACGAGT CGCTCTGGTT TGGCGCGATT
GTGGCACTGT CGAGCACGAT GGTCATCCTC AAGACATTGC TCGAACAGGG GCGGCTCGGT
TCACTGGCAG GGCGGATTAT GATGAGCATG CTGATCGTGC AAGACCTGGC GGTGGTGCCG
ATGCTCATTA TCCTGCCAAC GTTGCAGGAC CCCGGCGCAG GATTGCTGAC GCTCGGATGG
GCAATTCTCC ACGCTGCGCT GTTTCTTGCC CTGATGATCT ATGGCGGCAC GCGCCTGATG
CCGGTCATTC TGCGGCAGAT TGCTGCCTGG AATTCACGCG AACTCTATCT GATTGCAATT
GTTGCCATTG GGCTTGGCGT GGGGTATGCG ACCTATCTGG CGGGGCTGTC GTTTGCCTTC
GGCGCATTCG TCGCCGGTAT GGTCTTGAGC GAGTCGGAGC ACAGCCATCA TGCGCTCAGC
AGTATCGGTC CGCTTCGCGA TCTCTTTGGC CTGTTGTTCT TTGTATCGAT CGGCATGCTT
ATCGACCCGG CGTTTCTGAT CGATCACCTC GGCATTGTGC TGCTTGTCGT GGCGCTCGTC
GCCATCGGGA AGGCATTGAT CTTCGGCGCA ATCTCGCGCG CCTTCGGCTA TGCCGATGGC
ATTCCTATCC TGGTTGGATT GGGCATGTTT CAGATCGGCG AGTTTGCCTT TGTGTTGGCT
GAAGTCGGAC TGAATGCCAA TGCTATTCGC CAGGAAACCT TCACACTGGT GCTGGCAACG
GCGGTGGTGA CAATGGTGTT GACCCCGTTT GCGGTGCGTG GCGCCGATCC GCTGGCGGCG
CGGCTGCGGC GCACGCGAGA AGTGATCGAG GCTCATCTTG CTCCAGAACA AACGTTACGC
AACCATATTA TCATTATCGG CTATGGGAGG GTTGGGCGTT ATATTGCCGG AGCGCTTCAG
CATCTTCGTA TGCCTTGTGT GGTAATCGAC CAGGATTACA ATGCCGTCGA GCGGGCAAGG
AAAGCTGGCT TGCCGGTGAT CTATGGCGAC GGCGCCAGCC CGGTGGTGCT GGAAGCGGCT
GGATTGGCGC ACGCGCGCCT GGTGATGGTG GTCGTCGCCC GCGGAGTCGA TGTAGAGCAT
GTGGTGCGTC AGGTGCGTCA GTTGAATGCA ACCGTGCCGC TGATCGCGCG CGCGGCGAAT
GTGGCGCAGA TCGAGGAACT GCAACCGCTG GGTGTGGACG AAATCGTGCA GCCGGAGTTC
GAGGCGGGGA TCGAGATGGT GCGCCAGGCG CTGCTACGTT GTGATGTGGC GCCGGAGGCG
ATCGATGCGC TGAGCGATGT GGTGCGTCTG CACGGATATC AATCGCTGCG ACTGCCCGGG
CAGGAGGAAT TGCTGCTCAA TGCGCTGCGC AAATCCGCTT CGGCGACCAG CCTTGCCTGG
ATGACGGTCG AAGCCGGAGC GCCGCTCGAC GGCAAAACAA TCGGCGAAAA CCATATCCGC
TGGCGTACCG GCGCCACGAT TGTTGCTATC GAGCGAGACG CGGCGATGAT TGCCAACCCT
GGACCGGAGA CGTTGCTGCT GTCCGGCGAT CGACTCGCCG TTTGGGGAAC GCTCGCGCAG
CGTCAGGCGG TGCATGCGCT CTGCGTACCG TTGGACGATG CGGCAACCGA AGCGCCGCAA
CTGATGGATG GGCGCGCATC AGTGGAAGTC GATGCGTGCT GA
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| Protein sequence | MGIAADIAII VVAALIGGFV AQRFGQPLLL GYILAGVVVG PHTGGITVSN IHDIELLAEI
GVALLLFALG LEFNLGRMGK VRTIALAGTT IQILVTMAFG FGIGRMLGWP EYESLWFGAI
VALSSTMVIL KTLLEQGRLG SLAGRIMMSM LIVQDLAVVP MLIILPTLQD PGAGLLTLGW
AILHAALFLA LMIYGGTRLM PVILRQIAAW NSRELYLIAI VAIGLGVGYA TYLAGLSFAF
GAFVAGMVLS ESEHSHHALS SIGPLRDLFG LLFFVSIGML IDPAFLIDHL GIVLLVVALV
AIGKALIFGA ISRAFGYADG IPILVGLGMF QIGEFAFVLA EVGLNANAIR QETFTLVLAT
AVVTMVLTPF AVRGADPLAA RLRRTREVIE AHLAPEQTLR NHIIIIGYGR VGRYIAGALQ
HLRMPCVVID QDYNAVERAR KAGLPVIYGD GASPVVLEAA GLAHARLVMV VVARGVDVEH
VVRQVRQLNA TVPLIARAAN VAQIEELQPL GVDEIVQPEF EAGIEMVRQA LLRCDVAPEA
IDALSDVVRL HGYQSLRLPG QEELLLNALR KSASATSLAW MTVEAGAPLD GKTIGENHIR
WRTGATIVAI ERDAAMIANP GPETLLLSGD RLAVWGTLAQ RQAVHALCVP LDDAATEAPQ
LMDGRASVEV DAC
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