| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0020 |
|---|
| Symbol | |
|---|
| ID | 5537477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 22709 |
|---|
| End bp | 23590 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640892185 |
|---|
| Product | amidinotransferase |
|---|
| Protein accession | YP_001430177 |
|---|
| Protein GI | 156740048 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1834] N-Dimethylarginine dimethylaminohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000289153 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCAG GTACAACAAT GCGATCCTAT GGCGCTCAGA GCATGATTGC GCCGCTCCGA
CGGGTCGTTG TACGACGACC AGATAAGGCG TTCGGCGGGG CGGACCCGAA GCGCTGGCAT
TATACGGCGC GCCCCGATCT GGCGCGCGCG CAGGAGGAGC ACGACGCACT GGTCACCATC
CTGCGCAGCG CTAGTATCGA GGTGATCTAC CACGATCTGC CGCAACCCGG TCGGGCGGAC
GCTATCTTTG TCTTTGATCC GGCGATTGTT ACAAATGCAG GCGCGGTTAT TCTGCGCATG
GGGAAGGAAT TGCGGCGCGG CGAGGAAACG GCGCTGGCGC AGTGCTTCGC GCAGATCGGC
GTCCCGATCC TGGCAACGCT CGATGGCGCG GCGCTTGCCG AGGGAGGCGA TCTCCTCTGG
CTCGACGAAG AAACGCTTGC CGTCGGCATC GGGTTTCGCA CGAATGTCGA AGGGTTGCGT
CAGTTGACCG GGGCGCTGGC GCCGCACGGA ATCCGCACGC TGCCGGTCGA ACTGCCGTAC
TATCAGGGTC CCGACGCATG CCTGCACCTT TTGTCGCTGA TCAGCATCGT CGATGAGCGG
TTGGCGGTGG TCTATCCACC GTTGCTCTCG GCGCCGTTTT ATCAGGAATT GCAGCGCCGC
GGCTTTCGCC TGATTGAGGT TCCCGACACC GAATTCCCGA CGATGGGACC AAATGTGCTG
GCGCTGGCGC CCGGGCAGTG CCTGATGCTG GAAAATAACC CGGTGACAAA ACAACGCCTG
GAGGCGGCGG GGTGCGAGGT GCTGACCTAC CGCGGCGACG AGATTTCTCT GAAGGCGGAA
GGCGGTGCGA CCTGCCTGAC CCGCCCGATT TTGCGAGGAT AG
|
|---|
| Protein sequence | MKAGTTMRSY GAQSMIAPLR RVVVRRPDKA FGGADPKRWH YTARPDLARA QEEHDALVTI
LRSASIEVIY HDLPQPGRAD AIFVFDPAIV TNAGAVILRM GKELRRGEET ALAQCFAQIG
VPILATLDGA ALAEGGDLLW LDEETLAVGI GFRTNVEGLR QLTGALAPHG IRTLPVELPY
YQGPDACLHL LSLISIVDER LAVVYPPLLS APFYQELQRR GFRLIEVPDT EFPTMGPNVL
ALAPGQCLML ENNPVTKQRL EAAGCEVLTY RGDEISLKAE GGATCLTRPI LRG
|
|---|
| |