| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0628 |
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| Symbol | hoxN |
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| ID | 1222935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 763794 |
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| End bp | 764867 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240488 |
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| Product | high affinity nickel transporter transmembrane protein |
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| Protein accession | NP_522189 |
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| Protein GI | 17548849 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3376] High-affinity nickel permease |
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| TIGRFAM ID | [TIGR00802] high-affinity nickel-transporter, HoxN/HupN/NixA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.636922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTTCGC CGCTTTCCCG TCCGCGTTTT CGTCATCTGA TCGCGCAGCA TCGCGCGCCC
ATCAGCCAGC TCCTGCTGCT GATCATCGCC AACCTGGCCG CCTGGGCCTG GGCGCTGGCC
GCCTTCGGCG GCCACCCCGG ACTGCTCGGC ACCGCGCTGC TGGCCTACCT GTTCGGCCTG
CGCCACGCGG TCGACGCCGA CCACATCGCC GCGATCGACA ACGTGGTGCG CAAGCTGATG
CAGCAGGGCA AGCGCCCGTT CTCGGTCGGG TTCTTCTTCT CCATCGGCCA TTCGGCGCTG
GTCGTGCTGG GCGTGGCCAT CATCGTGCGG GCCACCTCGG CGCTCAATGA CCGCATCGAC
GCGTTCAAAG AGATCGGCGG CATGATCTCG ACGGGCATCT CGGCGTTCTT CCTGCTGACG
ATCGCCGTCA CCAACCTGGT GATTCTCGTC GGCACCTGGA AGCGCTTCAT GCGCGTACGC
GGCGGCGCCA CGCTGGCCGA GGCCGACCTG GACATGCTGA CCGCCGGCAA CGGCCTGCTG
GCGCGGCTGT TCCGCCCGAT GTTCCGGCTG GTGACCAAGA GCTGGCACAT GGCGCCGCTC
GGTTTCCTGT TCGGCCTGGG CTTCGATACC GCCACCGAGA TCGGGCTGTT CTCGGTCGCG
GCCGGGCATG CGTCGGACGG CATCCCGCCG TCGGCCGTGA TGGTGTTCCC GGTGCTGTTT
GCCGCTGGCA TGGCGCTGAT CGACACGCTC GACAGCGTGC TGATGGTGGG CGCGTACGGC
TGGGCCTTCG TCAACCCGGT GCGCAAGCTC TGGTACAACC TGACCATCAC CTCGGTCTCG
GTGCTCATCG CGTTCGGCAT CGGCGGCATC GAGGCGCTCG GGCTGCTGGC GCGGCAACTC
AACCTGAGCG GCGGCTTCTG GGACCAGGTG AGCTCGCTCA ACGAGGGGCT GGCCCACTTC
GGCTACCTGA TGATCGGCGT CTTCGTCCTG GCCTGGGCGG TATCGGCCTG CATCTACAAA
TGGAAGGGCT ACGACAGCCT GCCGCATCCG GCCCAGGGAG CCCCGCTGCC ATGA
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| Protein sequence | MASPLSRPRF RHLIAQHRAP ISQLLLLIIA NLAAWAWALA AFGGHPGLLG TALLAYLFGL
RHAVDADHIA AIDNVVRKLM QQGKRPFSVG FFFSIGHSAL VVLGVAIIVR ATSALNDRID
AFKEIGGMIS TGISAFFLLT IAVTNLVILV GTWKRFMRVR GGATLAEADL DMLTAGNGLL
ARLFRPMFRL VTKSWHMAPL GFLFGLGFDT ATEIGLFSVA AGHASDGIPP SAVMVFPVLF
AAGMALIDTL DSVLMVGAYG WAFVNPVRKL WYNLTITSVS VLIAFGIGGI EALGLLARQL
NLSGGFWDQV SSLNEGLAHF GYLMIGVFVL AWAVSACIYK WKGYDSLPHP AQGAPLP
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