| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp0226 |
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| Symbol | vdh |
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| ID | 1222357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 280919 |
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| End bp | 282373 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637240085 |
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| Product | vanillin dehydrogenase oxidoreductase protein |
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| Protein accession | NP_521787 |
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| Protein GI | 17548447 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000243231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.062724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAGA GCCAGTTGCT CATCGGTGGC AAGCAGCGCG CGGCCGCCGG TGGGGCGACC
TGCGAGCGCC CCAACCCCGC GACCGGAGAC GTCGCTTCGC GCGCGGCGGC GGCATCCCTG
GCGGATGCGG ATGCCGCCGT GCAGGCCGCG CACGCCGCGT TTCCCGCGTG GGCAGCGATG
CTGCCCGGCG AGCGCCGCCG CCTGCTGCTC AAGGCCGCCG ACGTGATGGA GCGCCGCGCC
GATGACTTCA TCGCGCGCGG CGTGGCCGAG GCCGGCGGCG TGCCCGGCTG GTACGGCTTC
AACGCGGCGC TGGCCGCGGG CATGCTGCGC GAGGCCGCCG CCATGACCAC GCAGGTGGGC
GGCGAGGTCA TCCCGTCCGA TGTGCCCGGC AGCCTGGCGA TGGGCCTGCG GCAGCCGTGC
GGCGTGGTGC TGGGGATCGC GCCGTGGAAC GCCCCGCTCA TTCTCGGCAC GCGGGCGATC
GCCATGCCGC TGGCCTGCGG CAACACGGTG GTGCTCAAGG CCTCGGAGAT CTGTCCGGCC
CTGCACAGCC TGATCGGCGC GGTGTTCGAA GAGGCCGGCT TTCCGGCGGG CGTGGTCAAC
GTCATCACCA ACGCGCCGGC CGACGCGCCG GCCATCGTGG AGCGGCTGAT CGCGCATCCG
GCAGTGCGGC GCGTCAACTT CACCGGCTCG ACCCGCGTGG GCCGCCTCAT CGCCGAGCAG
GCGGCGCGGC ATCTCAAGCC GGTCCTGCTG GAGCTGGGCG GCAAGAACCC CCTGGTCATT
CTCGACGATG CGGACCTGGA TGCCGCCGTG CAGGCCGCGG CGTTCGGCGC GTTCTTCAAC
CAGGGCCAGA TCTGCATGTC GACCGAGCGC ATCATCGTCG ACCGGGCCAT CGCCGACCGG
TTTGTCGAGC GGCTGACGGA CAAGGCAGGC GCCCTGCGGG CCGGCCGGCC GGGCCAGGAC
GGTGCTGTGC TCGGCGGCAT GGTGGACGCG AGCGCGGCCC AGCGGATCCG GCATTTGGTG
GACGATGCCG TCGGCAAGGG CGCGAGGCTG CGCACCGGCG CGCTGCGGAT CGACGGCAAC
ATCGTGCAGC CCGCCGTGGT CGACGGCGTG ACCCCGGCGA TGGCGCTCTA CGGCGAGGAG
TCGTTCGGGC CGGTGGTGGC GGTGCTGCGC GCGGCGGACG ACGAGGACGC CATCCGCCTG
GCCAACGACA GCGAATACGG CCTGTCGGCC GCGGTGTTCA GCCGCGATAT CGCGCGGGCC
ATGCAGGTGG CCAGGCGCAT CGAGTCCGGC ATCTGCCATA TCAACGGCCC CACCGTGCAC
GACGAGGCGC AGATGCCGTT CGGCGGCGTC AAGGCCAGCG GCTACGGGCG CTTCGGCGGC
AAGGCCGCCA TCGACGCCTT CACCGAACTG CGCTGGATCA CGGTCCAGGC CGGCGCACGC
CACTACCCGA TCTGA
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| Protein sequence | MFESQLLIGG KQRAAAGGAT CERPNPATGD VASRAAAASL ADADAAVQAA HAAFPAWAAM
LPGERRRLLL KAADVMERRA DDFIARGVAE AGGVPGWYGF NAALAAGMLR EAAAMTTQVG
GEVIPSDVPG SLAMGLRQPC GVVLGIAPWN APLILGTRAI AMPLACGNTV VLKASEICPA
LHSLIGAVFE EAGFPAGVVN VITNAPADAP AIVERLIAHP AVRRVNFTGS TRVGRLIAEQ
AARHLKPVLL ELGGKNPLVI LDDADLDAAV QAAAFGAFFN QGQICMSTER IIVDRAIADR
FVERLTDKAG ALRAGRPGQD GAVLGGMVDA SAAQRIRHLV DDAVGKGARL RTGALRIDGN
IVQPAVVDGV TPAMALYGEE SFGPVVAVLR AADDEDAIRL ANDSEYGLSA AVFSRDIARA
MQVARRIESG ICHINGPTVH DEAQMPFGGV KASGYGRFGG KAAIDAFTEL RWITVQAGAR
HYPI
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