Gene RSc3368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3368 
Symbol 
ID1222232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3627799 
End bp3628656 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID637239785 
Producthypothetical protein 
Protein accessionNP_521487 
Protein GI17548085 
COG category[R] General function prediction only 
COG ID[COG2961] Protein involved in catabolism of external DNA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAGCT ACCGACACGC CTTCCACGCC GGCAACCATG CCGACGTCCT CAAGCACGCC 
ATCGTGGTGC AGCTGCTCGA TCACCTGACG CAGAAGGACA AGGCGTTCTG GTACATCGAC
ACGCATGCCG GGGCCGGGCT CTACGCGCTC GATCACGCCT GGGCGAAGAA GAAGGCCGAG
TTCGAGACCG GCATCGACCG TCTGTGGCAT GCCGTGGCCG CCGGCCAGAC GCTGCCGCCG
CTGCTCGATG CCTACCTGGA CCAGGTGCGC TCGCTGAACC CCGACGGACG GCTCAAGCAC
TACCCCGGCT CGCCATGGCT GGCATGGCAG ATGGTGCGCG ACCATGACCG CCTGCGCCTG
TTCGAGCTGC ACAGCTCGGA GATCCAGGTG CTGAGCAACA ACTTCCGTGG CGCCGGCCGC
AAGGTCATGC TCTATGACGG CGACGGCTTC GGCGGCATCA AGGCCATCCT GCCGCCGCCG
CCCCGGCGCG CGCTGGTGCT GATCGACCCG TCTTTCGAAG ACAAGCAGGA CTACGCGCGC
ACCGTGCAGA CCCTGCAGGA CAGCCTGCAG CGCTTTGCCA CGGGCACGTA CGCGATCTGG
TATCCGCAGG TGCAGCGGCG CGAATCGGCG CAGCTGCCGG CGCGGCTCAA GCAGCTGGGC
CTGTCCGACT GGCTCCACGT CACGCTGACG GTCAAGCGCC CGGTCGAGGG CGGCCTCGGT
CTGCACGGCA GCGGCATGTT CATCGTCAAC CCGCCGTGGA CGCTCAAGGC GCAGCTGCAG
GACGCCATGC CGACGCTGGT GCGGCTGCTC GGCCAGGACG ACGGGGCCGG CTTTACGCTG
GAGGCGCAGG CGAGCTGA
 
Protein sequence
MLSYRHAFHA GNHADVLKHA IVVQLLDHLT QKDKAFWYID THAGAGLYAL DHAWAKKKAE 
FETGIDRLWH AVAAGQTLPP LLDAYLDQVR SLNPDGRLKH YPGSPWLAWQ MVRDHDRLRL
FELHSSEIQV LSNNFRGAGR KVMLYDGDGF GGIKAILPPP PRRALVLIDP SFEDKQDYAR
TVQTLQDSLQ RFATGTYAIW YPQVQRRESA QLPARLKQLG LSDWLHVTLT VKRPVEGGLG
LHGSGMFIVN PPWTLKAQLQ DAMPTLVRLL GQDDGAGFTL EAQAS