Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3368 |
Symbol | |
ID | 1222232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3627799 |
End bp | 3628656 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637239785 |
Product | hypothetical protein |
Protein accession | NP_521487 |
Protein GI | 17548085 |
COG category | [R] General function prediction only |
COG ID | [COG2961] Protein involved in catabolism of external DNA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAGCT ACCGACACGC CTTCCACGCC GGCAACCATG CCGACGTCCT CAAGCACGCC ATCGTGGTGC AGCTGCTCGA TCACCTGACG CAGAAGGACA AGGCGTTCTG GTACATCGAC ACGCATGCCG GGGCCGGGCT CTACGCGCTC GATCACGCCT GGGCGAAGAA GAAGGCCGAG TTCGAGACCG GCATCGACCG TCTGTGGCAT GCCGTGGCCG CCGGCCAGAC GCTGCCGCCG CTGCTCGATG CCTACCTGGA CCAGGTGCGC TCGCTGAACC CCGACGGACG GCTCAAGCAC TACCCCGGCT CGCCATGGCT GGCATGGCAG ATGGTGCGCG ACCATGACCG CCTGCGCCTG TTCGAGCTGC ACAGCTCGGA GATCCAGGTG CTGAGCAACA ACTTCCGTGG CGCCGGCCGC AAGGTCATGC TCTATGACGG CGACGGCTTC GGCGGCATCA AGGCCATCCT GCCGCCGCCG CCCCGGCGCG CGCTGGTGCT GATCGACCCG TCTTTCGAAG ACAAGCAGGA CTACGCGCGC ACCGTGCAGA CCCTGCAGGA CAGCCTGCAG CGCTTTGCCA CGGGCACGTA CGCGATCTGG TATCCGCAGG TGCAGCGGCG CGAATCGGCG CAGCTGCCGG CGCGGCTCAA GCAGCTGGGC CTGTCCGACT GGCTCCACGT CACGCTGACG GTCAAGCGCC CGGTCGAGGG CGGCCTCGGT CTGCACGGCA GCGGCATGTT CATCGTCAAC CCGCCGTGGA CGCTCAAGGC GCAGCTGCAG GACGCCATGC CGACGCTGGT GCGGCTGCTC GGCCAGGACG ACGGGGCCGG CTTTACGCTG GAGGCGCAGG CGAGCTGA
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Protein sequence | MLSYRHAFHA GNHADVLKHA IVVQLLDHLT QKDKAFWYID THAGAGLYAL DHAWAKKKAE FETGIDRLWH AVAAGQTLPP LLDAYLDQVR SLNPDGRLKH YPGSPWLAWQ MVRDHDRLRL FELHSSEIQV LSNNFRGAGR KVMLYDGDGF GGIKAILPPP PRRALVLIDP SFEDKQDYAR TVQTLQDSLQ RFATGTYAIW YPQVQRRESA QLPARLKQLG LSDWLHVTLT VKRPVEGGLG LHGSGMFIVN PPWTLKAQLQ DAMPTLVRLL GQDDGAGFTL EAQAS
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