Gene RSc3267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3267 
Symbol 
ID1222131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3519071 
End bp3519775 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content73% 
IMG OID637239684 
Productputative lipoprotein 
Protein accessionNP_521386 
Protein GI17547984 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGC TCACCCATCC GCTCCCCAGC CCTTCGGCCG GCCGCACGCT GCGTGCTTGG 
CTGCTGCACG GCGCCACCCT GGTGGTGCTG GCGGGCTGTG CCGCCGTACC GGGCGAGCCG
CCGGCCACGG CCACGAACGC CCCCGCGCAC CCGGCCGATA CGCGCGACAA CCCCGATGCC
TGGGGCACGC TGGCCTTCCG CGGCATGCCG GAATCCAGCA GCCTGCAGAT GGCACCCGCC
GATACCGAGC CGGGCCTGCG CGCAGACCTC GGCACGTTCG AGCAGCGCGG TCTCGCGTCC
TGGTACGGCC GCGGCTTCCA CGGCCGGCGC ACCGCCAGCG GCGAGCGCTT CGACATGAAC
GCCTTCACCG TCGCGCATCC GTCGCTGCCG CTGTCGAGCT GGGTGCTGGT GCGCAACCTG
TCCAACGACC GCGTTGTCGT CGCCAAGGTG ACCGACCGCG GGCCGTATCA CGGCAAGCGC
ATCATCGATC TGTCCTACGC CGCCGCCAAG CGGCTCGATT TCGTCCGGCG CGGCTCGACC
CAGGTGGAAA TCCGCCGCCT GTCGCGCGCC GAGGTCGAGG CACTGCGCCC CGAGCTGACG
CAGACCGACG TCGCCAGCAA CAGCGGCGAC GCCGACATGG GCGCCGACGA ACCCGCGCCG
CCGCGCAAGA AGGCGGTCAA GCGCCGGGCC CGCGCGCGCC GCTAA
 
Protein sequence
MLKLTHPLPS PSAGRTLRAW LLHGATLVVL AGCAAVPGEP PATATNAPAH PADTRDNPDA 
WGTLAFRGMP ESSSLQMAPA DTEPGLRADL GTFEQRGLAS WYGRGFHGRR TASGERFDMN
AFTVAHPSLP LSSWVLVRNL SNDRVVVAKV TDRGPYHGKR IIDLSYAAAK RLDFVRRGST
QVEIRRLSRA EVEALRPELT QTDVASNSGD ADMGADEPAP PRKKAVKRRA RARR