Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3267 |
Symbol | |
ID | 1222131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3519071 |
End bp | 3519775 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637239684 |
Product | putative lipoprotein |
Protein accession | NP_521386 |
Protein GI | 17547984 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAGC TCACCCATCC GCTCCCCAGC CCTTCGGCCG GCCGCACGCT GCGTGCTTGG CTGCTGCACG GCGCCACCCT GGTGGTGCTG GCGGGCTGTG CCGCCGTACC GGGCGAGCCG CCGGCCACGG CCACGAACGC CCCCGCGCAC CCGGCCGATA CGCGCGACAA CCCCGATGCC TGGGGCACGC TGGCCTTCCG CGGCATGCCG GAATCCAGCA GCCTGCAGAT GGCACCCGCC GATACCGAGC CGGGCCTGCG CGCAGACCTC GGCACGTTCG AGCAGCGCGG TCTCGCGTCC TGGTACGGCC GCGGCTTCCA CGGCCGGCGC ACCGCCAGCG GCGAGCGCTT CGACATGAAC GCCTTCACCG TCGCGCATCC GTCGCTGCCG CTGTCGAGCT GGGTGCTGGT GCGCAACCTG TCCAACGACC GCGTTGTCGT CGCCAAGGTG ACCGACCGCG GGCCGTATCA CGGCAAGCGC ATCATCGATC TGTCCTACGC CGCCGCCAAG CGGCTCGATT TCGTCCGGCG CGGCTCGACC CAGGTGGAAA TCCGCCGCCT GTCGCGCGCC GAGGTCGAGG CACTGCGCCC CGAGCTGACG CAGACCGACG TCGCCAGCAA CAGCGGCGAC GCCGACATGG GCGCCGACGA ACCCGCGCCG CCGCGCAAGA AGGCGGTCAA GCGCCGGGCC CGCGCGCGCC GCTAA
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Protein sequence | MLKLTHPLPS PSAGRTLRAW LLHGATLVVL AGCAAVPGEP PATATNAPAH PADTRDNPDA WGTLAFRGMP ESSSLQMAPA DTEPGLRADL GTFEQRGLAS WYGRGFHGRR TASGERFDMN AFTVAHPSLP LSSWVLVRNL SNDRVVVAKV TDRGPYHGKR IIDLSYAAAK RLDFVRRGST QVEIRRLSRA EVEALRPELT QTDVASNSGD ADMGADEPAP PRKKAVKRRA RARR
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