Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3257 |
Symbol | |
ID | 1222121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3512278 |
End bp | 3512736 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637239674 |
Product | putative signal peptide protein |
Protein accession | NP_521376 |
Protein GI | 17547974 |
COG category | [S] Function unknown |
COG ID | [COG1416] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGCA GTTTCTTCCG CCTGACCGCC GCGCTGGCCG CGCTGGGCGT AGCCGGCAAG GCGTCGGCGC AGGCCGCCGG ACAGGCGCGC GGCGCCGCGG GCGGGCGCTA CAAGGTGGTC TACCAGATCA GCGAAGGCAC CGAGCAGGCG GTGCGCGCCA TCGGCAACCT GCGCAATCAC CTCAACGGCG CGCCCGGCAC GCGCATCGTG GTGGTGGCGC TGGGGCGGGG CATCGACTTC CTCGTCGAAG GCGCCAAGGA CGACAAGGGC CGCCCCTTCG ACGCGCCGGT CGCCGCGCTC GCCGGCATGG GCGTGGAATT CCGCGTGTGC CACAACTCGC TGGCCGCCTT CAAGGTGCCC GAAGACAAGC TGCTGCTGGA GGCCAAGGTG GTGCCGGCCG GTGTGGTGGA GGTCACCCGC CTGCAGCAGG ACGAAGGCTT TGCCTATCTC AAGCCGTAG
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Protein sequence | MRRSFFRLTA ALAALGVAGK ASAQAAGQAR GAAGGRYKVV YQISEGTEQA VRAIGNLRNH LNGAPGTRIV VVALGRGIDF LVEGAKDDKG RPFDAPVAAL AGMGVEFRVC HNSLAAFKVP EDKLLLEAKV VPAGVVEVTR LQQDEGFAYL KP
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