| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3183 |
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| Symbol | |
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| ID | 1222046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3442287 |
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| End bp | 3444827 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637239601 |
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| Product | hemagglutinin-like signal peptide protein |
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| Protein accession | NP_521304 |
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| Protein GI | 17547902 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.855089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATTCAC CACACCGCCC GGCCCAGTTG GCCGCGCTCC TCGGCCTCTA CGCCATCCTC
ATCCCACCAG CCGCCATCGC CGCCGGCATC GTCCCCGACG GCGGCACCGC CACCACGGTC
ACCACAGGCG CCAATGGCCG CCCAGTAGTC AACATCGCCC CCAGCACCGC AGGCGTCTCC
CACAACATCT ACACCTCCTT CAACGTAGGC CCAGTCGGCG CCGACCTGAA CAACGCCATC
GTCCGCGCTC GCACCATCGT CAACCAGGTC ACCAGCACCG ACCCGTCGCT GATCCAGGGC
AACATCGCCG TGCTGGGGCC GCGCGCCAAC GTGATCATCG CCAACCCGAA CGGCATCACG
GTGGACGGTG GTTCGTTCAC CAACACGGGC AATGTGGCGC TGACCACGGG CCAGGTGTCG
TTCAACGACT TCACCACGGG CGCCGGCCAG CTGCAGCGCA ACGTGGTGCT CAATACCGGC
GCCGGCGCCA TCAACATCGG CCCGGGCGGC CTGGCCGGGG CGATGCTGAA CCTGGAGCTG
ATCGCCAAGC AGGTGCGCGT GGCGGGCGCG GTGCAGAACA GCTTCACCGA TGCCAACAGC
AAGGTCCGCA TCGTCGCGGG CGACAGCCGG GCGGAGATCG ATACCAGCGT GTCGCCCACC
GATAACCTGA ACCCGTGGGT CACCTACAGC AGCACGGGAT CGGGCCGGCC GCTGGGGCTG
GCCATCGATA TCGCGTCGGG CGGGTCGCTC ACGGGCGGGC GGATCGAGCT GCTGGTCACG
GACCAGGGTG CGGGTGTGCG GCACGCCGGC GCGGCGTTTG CGACGGCCGG CGACTTCGTC
ATCAGCGGTA CGGGCGATTT GCAGTTGGCT GGCGGCGGCG TCAGCGCGGC CAATGATGTG
CTGATCGGTT CGGCGGGTCT GTTGGGCAAT GGCGCACTGA CGGCCGGTCG GAACCTCCAG
GTGAGTGCGA ACAAGGTGCA TCTCGATGGC ACGACGTTGT CGGCGGGTAC CGCGTCACAG
GTCGGCAGCA TCGTGATCGG CGCGTCGGGG CAGGTGCATA CCGAGCCGGT CACGATCGAC
CACGGCACGC TGAGCGCGAC GGGCGGCGTC GGCCTGTTCG ATGCCGGGCC CGGTGTCTCC
ATGACGGCGA CGCAGTTGAC GGCGGCCCAG AACGTGGTCG CGCAGGTCGG GGCGCTGTCG
CTCGGTGCGG ATGCGTCGGG CGCGAGCCGA TGGACCTCGC AGCAGGGCAC GGTGGCCATC
ACTGCGCCCG GTGCCATGCA GGTGGCGGGC AGCAAGATCG ACGGCACGGG CGGGACGACG
GTGCAGGCCG GCTCCATCGC GCTCAGCGCG GTGAATGGCA CGGCGGCCAC GGTGCAGTCC
TCGGGCGGCG ACGTGACGCT GAATGCCACG GGTGCCTACG CGCAGACCGA CTCGAACGTC
ATCGCAGCAG GCAATGCGAC GATCCACGGC GGCAGCGTCA ACTTCGCGGC GTCGGCGCTG
CCGGCGTCGG TGGCGGCCAT GAGTGGCGGT GTGCTGATCC GGAGCGATGC GGATCTCGTC
AACCTCGGCG GGCTGATCCA GGGCAAGACG CGCAACGCCG GCCAATCGGC CTCCGAAGGC
GCGGTCACGC TGATTGCGGC TGGAGTCGTG CGCAACGATG CCACCGCGAG CACGCAGGGC
ATTGTCTTCG GCCAGGACGA TGACGTGGTG GTGCGCGCCG GCGGCGACAT CGTCAACCAC
CAGAGCCGCA TCCTGTCGAA CGCGAAGCTG ACGTTGGCCG CGCAGGGCGA TGTGTTCAAC
ACGCTGGACA AGACCGCCGG CGCCAACGGC GAGAAGCCTG TCGCCTGGAC CAGCAGCGGC
ACGCGCTGGC TGTTCCTGCG CAACCACAGC GCGGGGCTCG ATGTGGACTA CGGTTCCATT
GCGCAGACGG GCCAGGTGCC GTATTTCGTG TCGCAGACGG GCACGACGAT CAGCGGCCGC
AATGTCAGCA ACGTCGGCGG GCAGGTGCTT TCCAACGGCG GCGATATCGC CATCACGGCC
GCCAACGTTT TCCATAACGA AGTGCTGGCG ACGGGCTCGG CGCACTTCAG CCGCAGCTGC
ATGATCTTCT GCCGCACCGA GGCATCGAGC ACGGTGTCGA CCACGGGCGG TACGATCTCG
GCGGCGGGCA ACCTGTCCAT CCGGGCCGGC ACGCTGGCCG AGAACATCGG CGGGCAGGTG
CTCTCCATCG GCAGCATGAC CGTGACCGCG CCCAAGGTGC GCGCGGTCGG CATCACCGGC
TATACGGCGC TGGCGCGCGA GCGCGGCTTC AAGGCGTTCT TCGGCGATAC GTGGGCGCGC
CTGTACGCGG CCGACGTGGG CGGCAGCTGG TTCGCCATCG GCGGTGGCTT GACGATCAAC
GGCCAGGGCC AGATCGAGGG CGGCAGTTTC GACGGGCAGA GCGTCACCGC CAGCAATGGC
ATCGTGACGG TGCGAGCCAA GTCGCGGCAG CCGGTGTCGA TCGAGTCGCG AGTCGGCTTG
ACGTCGTGGT TGTGGCAGTG A
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| Protein sequence | MHSPHRPAQL AALLGLYAIL IPPAAIAAGI VPDGGTATTV TTGANGRPVV NIAPSTAGVS
HNIYTSFNVG PVGADLNNAI VRARTIVNQV TSTDPSLIQG NIAVLGPRAN VIIANPNGIT
VDGGSFTNTG NVALTTGQVS FNDFTTGAGQ LQRNVVLNTG AGAINIGPGG LAGAMLNLEL
IAKQVRVAGA VQNSFTDANS KVRIVAGDSR AEIDTSVSPT DNLNPWVTYS STGSGRPLGL
AIDIASGGSL TGGRIELLVT DQGAGVRHAG AAFATAGDFV ISGTGDLQLA GGGVSAANDV
LIGSAGLLGN GALTAGRNLQ VSANKVHLDG TTLSAGTASQ VGSIVIGASG QVHTEPVTID
HGTLSATGGV GLFDAGPGVS MTATQLTAAQ NVVAQVGALS LGADASGASR WTSQQGTVAI
TAPGAMQVAG SKIDGTGGTT VQAGSIALSA VNGTAATVQS SGGDVTLNAT GAYAQTDSNV
IAAGNATIHG GSVNFAASAL PASVAAMSGG VLIRSDADLV NLGGLIQGKT RNAGQSASEG
AVTLIAAGVV RNDATASTQG IVFGQDDDVV VRAGGDIVNH QSRILSNAKL TLAAQGDVFN
TLDKTAGANG EKPVAWTSSG TRWLFLRNHS AGLDVDYGSI AQTGQVPYFV SQTGTTISGR
NVSNVGGQVL SNGGDIAITA ANVFHNEVLA TGSAHFSRSC MIFCRTEASS TVSTTGGTIS
AAGNLSIRAG TLAENIGGQV LSIGSMTVTA PKVRAVGITG YTALARERGF KAFFGDTWAR
LYAADVGGSW FAIGGGLTIN GQGQIEGGSF DGQSVTASNG IVTVRAKSRQ PVSIESRVGL
TSWLWQ
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