Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3157 |
Symbol | |
ID | 1222020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3411565 |
End bp | 3412401 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637239575 |
Product | hypothetical protein |
Protein accession | NP_521278 |
Protein GI | 17547876 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAATA AAACCCACGA AATCCGCCCG AACCAGTCGA TCGAGTTGCT GAAGGAACTG CACATCCTGA CGCGCGACGG CAAGATGAAT CAGGACAGCC GCCGCAAGCT GAAGCAGGTC TATCACCTGT TCCAGTTCAT CGAGCCGCTG CTCGACGACG TACAGAAAGC GAAGGGACAT GTATCGCTTG TCGATCACGG CGCGGGCAAG TCGTACCTCG GCTTCATCCT CTACGACCTG TTCTTCAAAG AGCAACCCGG CGACGGTGCT TCGCACATCT ATGGCATCGA AACGCGCGAA GCGCTCGTGG CGAAGTCGAC CGAGCTCGCG GCGCGGCTCG GCTTCAAGGG GATGTCGTTT CTGAACGTGT CGGTGGCGGA ATCGATCACG TCGGAGCGCC TACCGCCTGC CGTCGACGTC GTGACCGCGC TGCACGCGTG CAACACCGCC ACCGACGATG CGATCCGCTT CGCGCTCGAA AAGCATGCGC AGTACATCGT GCTCGTGCCC TGCTGCCAGG CGGAGGTCGC CGGCGTGTTG CGCCGGAACA AGGGCAAGTC GCTCGGCAAT GCGTTGACGG AAATCTGGCG TCATCCGCTG CATACGCGCG AATTCGGCAG CCAGGTCACA AACGTGCTGC GCTGCCTGCA GCTCGAAGCC CACGGCTATC AGGTGAGCGT GACGGAGCTC GTCGGCTGGG AGCATTCGAT GAAAAACGAG CTGATCGTTG CGCAGTACAA AGACCTGCCT CGGCGGCGTC CGACTGAGCG GCTCGCTGAA GTGCTCAGCA CGCTCGGCCT CGAAGAACTG CGCGAGCGCT TCTTTGCGCC GGCGTGA
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Protein sequence | MSNKTHEIRP NQSIELLKEL HILTRDGKMN QDSRRKLKQV YHLFQFIEPL LDDVQKAKGH VSLVDHGAGK SYLGFILYDL FFKEQPGDGA SHIYGIETRE ALVAKSTELA ARLGFKGMSF LNVSVAESIT SERLPPAVDV VTALHACNTA TDDAIRFALE KHAQYIVLVP CCQAEVAGVL RRNKGKSLGN ALTEIWRHPL HTREFGSQVT NVLRCLQLEA HGYQVSVTEL VGWEHSMKNE LIVAQYKDLP RRRPTERLAE VLSTLGLEEL RERFFAPA
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