| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3138 |
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| Symbol | |
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| ID | 1222002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3387988 |
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| End bp | 3388776 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637239556 |
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| Product | oxidoreductase protein |
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| Protein accession | NP_521259 |
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| Protein GI | 17547857 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTCC ACCTTCAGAA CAAGCTCGCT CTCGTGACTG GCTCCACCAA AGGGATCGGC
CACGCCATCG CCGTCGCGCT GGCCGCCGAG GGCGCCCGCG TCATCCTCAA CGGCCGCACC
GATGCGTCGG TGGCCGAGGC GGTGTCCCGC CTGCTGGCCG AAGTGCCCGG CGCCCATGCC
GAAGCCTTCG CCGGCGACCT GTCCGACCCC GCGCAGGCCC GGGCGCTGGC GGCGCGCTTC
CCGCGGGTGG ACATCCTGGT CAACAACCTC GGCATCTTCG ACCCCAAGCC GTTCGAGGAC
ATCGACGATG CCGAATGGCT GCGCTTCTTC AGCGTGAACG TGATGAGCGG CGTGCGCCTG
TCGCGTGCCT ACCTGCCGGG GATGAAGGCG CAGAACTGGG GCCGCATCGT CTTCATCAGC
AGTGAGAGCG GGGTGCAGAT CCCGGCGGAG ATGGTCCACT ACGGTGTGAC CAAGACGGCA
CTGCTCGGCC TGTCGCGCGG GCTGGCCGAA CTGTGCGCGG GCACCGCCGT GACGGTCAAT
GCCGTGCTGC CCGGCCCGAC GCGCTCCGAA GGGGTCGAGG CCTTCACGCG CAAGCTGTCG
GGCGGCCAGG GTTTCGAGGC CTTCGAGAAG GCCTTCTTCG AGACCGCGCG GCCGACCTCA
CTGATCAAGC GCTTCGCCAC GCCGCAGGAG GTCGCCAGCC TGGTCGCCTA TGTGGCCAGC
CCGCTGTCGT CGGCCACCAC AGGCGCCGCG CTGCGGGTGG ATGGCGGCGT GGTGAAGTCA
GCGTTCTGA
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| Protein sequence | MDLHLQNKLA LVTGSTKGIG HAIAVALAAE GARVILNGRT DASVAEAVSR LLAEVPGAHA
EAFAGDLSDP AQARALAARF PRVDILVNNL GIFDPKPFED IDDAEWLRFF SVNVMSGVRL
SRAYLPGMKA QNWGRIVFIS SESGVQIPAE MVHYGVTKTA LLGLSRGLAE LCAGTAVTVN
AVLPGPTRSE GVEAFTRKLS GGQGFEAFEK AFFETARPTS LIKRFATPQE VASLVAYVAS
PLSSATTGAA LRVDGGVVKS AF
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