| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3119 |
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| Symbol | |
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| ID | 1221983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3358523 |
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| End bp | 3359989 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637239537 |
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| Product | transcription regulator protein |
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| Protein accession | NP_521240 |
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| Protein GI | 17547838 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTACG GTGTCCTGCT GTCGACCTAC GAACGCGAGA CCGGCCGCGA GGCAATCGCC
CGGATGCCCC AGCAGCATCG GCTGTACGCC TGCCTGCGCG CCGCCATCCT GAGCGGCAAG
CTCGAGGAAG GCACGCGGCT GCTGGCGTCG CGCACGCTGG CCGAGGAGCT GGGCATGGCC
CGCAACTCGG TGCTGTATGC GTACGAACGG CTGGCGTCCG AGGGTTTCGT CGTCGGGCGG
CGGCAGGGTA CGGTGGTCGC CCGCGTGGGC CTGCAGCAGT CGCCCGCCGC CACGCCCGGC
GATGCGCCCG TCCTGTCGCG GCGCGTCGCC CGGATCGAAC GCCCCGGCGA CGGCATGGAC
GATCCGCTGC CCTTCCTGCC CGGCACGCCC GCGCTGGGTG CCTTTCCGCT CGCGCAATGG
CGGCGCTGCG TGGAGCGCGC CTGGCGCAGC ATCGGCCCGG CGCAGCTCGG CTACATGCCG
GTCGAAGGCA ACGCTGCCCT GCGCCAGGCG ATCGCCGAAT ACCTGCGCGT CTCGCGCGGC
GTGCGCTGCG AGGCCAGGCA GGTTTTCATC ACCGACGGCA CGCAGAACAG CCTCGACCTG
TGCGCCCGCA CCCTGGCCGA TGCCGATGAC ACCGCCTGGA TCGAAAACCC CGGCTACAGC
GGCGCGCGCC ACGCCTTCCA GGCCGCCAAC CTGCGGCTGG CGCCGATCCC GGTCGATGCC
GACGGGCTCG CGCCACGGCC GGAGGACTGG CGCGACCGTC CGCCCAGGCT GATCTACATC
ACGCCGTCGC ACCAGTACCC GCTCGGCGCC GTGATGAGCC TGGAGCGGCG GCTGGCGCTG
CTGGCCCAGG CGCGCGCGGC CGGCGCGTGG ATCATCGAAG ACGACTACGA CAGCGAATTC
CGTCACCAGG GCGCGCCGCT GTCCGCGGTG CAGGGATTGA CCGAAGACGC GCCGGTGATC
TATCTCGGCA CCTTCAGCAA GGTGATGTTC CCGGCGCTGC GGCTCGGCTT CATGGTGGTG
CCGCCCGCGC TGGCGCCGGT GTTGCGGCGC ACGGCCGGCG CGCTGATGCT GCGCGGGCGG
GTGGCGGAGC AGCTCGCGCT GGCGGACTTC ATCGACGCCG GGCATTTCAC GCGGCACCTG
CGGCGCATGC GGCGGCTGTA TGCGGAGCGG CGCGACGCGT TGCAAGGCGC GCTCGAACGC
CGGCTGCGCG GCCTGCTGAC CGTGTCCGGC GGGGCCGGCG GCATGCATCT GTCGGCACGG
CTCGACGTGC CGGTGCGGGA TACCGAGGTC AGCCGCGTAG GCCGAGCACA CGGGCTGGTG
CTGCGGCCGC TGTCGCGGTT CTGCCTGCCG GGCACCGAAG GCCCCTACAA CGGTCTGGTG
CTCGGCTACG GCGCGGTGGA TGCCGGGCGG ATGGACCGGC TGGTCCAGCA GCTCGGGCAG
GTGATCGAGG CAGCGCTGGC GGGATGA
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| Protein sequence | MDYGVLLSTY ERETGREAIA RMPQQHRLYA CLRAAILSGK LEEGTRLLAS RTLAEELGMA
RNSVLYAYER LASEGFVVGR RQGTVVARVG LQQSPAATPG DAPVLSRRVA RIERPGDGMD
DPLPFLPGTP ALGAFPLAQW RRCVERAWRS IGPAQLGYMP VEGNAALRQA IAEYLRVSRG
VRCEARQVFI TDGTQNSLDL CARTLADADD TAWIENPGYS GARHAFQAAN LRLAPIPVDA
DGLAPRPEDW RDRPPRLIYI TPSHQYPLGA VMSLERRLAL LAQARAAGAW IIEDDYDSEF
RHQGAPLSAV QGLTEDAPVI YLGTFSKVMF PALRLGFMVV PPALAPVLRR TAGALMLRGR
VAEQLALADF IDAGHFTRHL RRMRRLYAER RDALQGALER RLRGLLTVSG GAGGMHLSAR
LDVPVRDTEV SRVGRAHGLV LRPLSRFCLP GTEGPYNGLV LGYGAVDAGR MDRLVQQLGQ
VIEAALAG
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