Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3046 |
Symbol | |
ID | 1221909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3283240 |
End bp | 3284358 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637239463 |
Product | putative sugar-phosphate ATP-binding ABC transporter protein |
Protein accession | NP_521167 |
Protein GI | 17547765 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.512316 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTCTGG AACTGGACCA GGTCACGGCC GTGGCCGGCG CACAGACCCA TCTGTACCCG ACCAGCGTGC GGCTGGCGCC CGGCGCCATC AACGTGCTGC TCGGGCCGAC GCAGGCCGGC AAGACCACAC TGATGCGCAT CATGGCCGGT CTGGACCGGC CGACCACCGG CCGCGTGCTG GTCGACGGCG AGGACGTGAC CGGCGTGGGG GTCCGCGATC GCAACCTGGC GATGGTGTAC CAGCAATTCA TCAACTACCC GGCGATGACG GTGTACGACA ACATCGCCTC GCCGCTGCGC CTGCAGGGGA CGGCCAGGGA CGAGATCGAC GCGCGCGTGC GCACGGTCGC CGCCAAGCTG CACATCGACC ACCTGCTGCA GCGGCTGCCG GCAGCGCTAT CCGGCGGGCA GCAGCAGCGC TGCGCGCTGG CGCGGGCGCT GGTCAAGCGC GCGCCGCTGG TGCTGCTCGA CGAGCCGCTG GTCAACCTCG ACTACAAGCT GCGCGAGGAA CTGCGCGCTG AGCTGGCCTC GCTGTTTGCC GACGGCAGCA CCACGGTGGT CTACGCCACC ACCGAACCGC AGGAAGCGCT GCTGCTGGGC GGCCAAACCA TCGTGATGCA CGAAGGCCGG GTGCTGCAGT CCGGACCAAC CCTGCAGATG TACGACGTGC CGGTGTCGGT GGACGCCGCC GCCATCTTCA ATGACCCACC GATGAACGTC TTCCGCGCCA CGGTGGTGGA AGGCAACCAC ATCCGCCTGC CGCACGGGAT CGACGTGCCG TGGACGCGCC CGCTGCCGAT GCACGCCGGC ACCCGCTGCC GCGTCGGCCT GCGGCCGAGC CACATCCGGC TGTCGGCGCG CAACGGCCGC TGCGTGGCCC TGCCGGGGCT GGTGGAGCTG GCCGAGCTGT CGGGCTCGGA GACGTATCTG CACGTGCGCG CGCATGCGCC GGGCGAGCCC GGCGGCATCG GCCTGGTGGC GCAGCTGCCG GGCGTGCACG AGTTCGGGCT GGGCGCGGCA CTGGATGTGT TCGTCGATCC GGCCGAGCTG TTCCTGTTCG ACGACGCGGG CAAGCTGGTG AGCGCGCCCA AGCAGGAGGC ATCGCATGGC GCGCATTGA
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Protein sequence | MILELDQVTA VAGAQTHLYP TSVRLAPGAI NVLLGPTQAG KTTLMRIMAG LDRPTTGRVL VDGEDVTGVG VRDRNLAMVY QQFINYPAMT VYDNIASPLR LQGTARDEID ARVRTVAAKL HIDHLLQRLP AALSGGQQQR CALARALVKR APLVLLDEPL VNLDYKLREE LRAELASLFA DGSTTVVYAT TEPQEALLLG GQTIVMHEGR VLQSGPTLQM YDVPVSVDAA AIFNDPPMNV FRATVVEGNH IRLPHGIDVP WTRPLPMHAG TRCRVGLRPS HIRLSARNGR CVALPGLVEL AELSGSETYL HVRAHAPGEP GGIGLVAQLP GVHEFGLGAA LDVFVDPAEL FLFDDAGKLV SAPKQEASHG AH
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