Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2696 |
Symbol | |
ID | 1221543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2902703 |
End bp | 2903206 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637239097 |
Product | signal peptide protein |
Protein accession | NP_520817 |
Protein GI | 17547415 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.376208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAT TTGCACTCAA GACTGCCCTG GCCGCCGTGC TTTGTTCCGC TGCCGCAGTT GCATCGGCCG CATCGACCAG TTCCTCCTTC GGCGTGTCGA CCACGGTCAA TGCCATCTGC GTCATCAATT CGGCCGGCGC GTTGACCTTC ACCGCCTTCG ACCCGAGCCA GGGCGCGCAG GCATCGACCT CGTCGATCAG CGTGAACTGC AGCAACACCA CGCCGTTCAA CATCAGCCTC GATGCGGGCG CCGGGCCGAG CGCCACGGTG GCCAGCCGCG TCATGACGAG CGGCGGCAAT ACGCTCACCT ATTCGCTGTT CCAGGACTCG GGGCACACCT CGGTCTGGGG CAACACGGTG GGCACCAACA CCGTGGCAGG CACGGGGGCC GGCATGGCAC CCGCCAACGC GATCACCAAG ACGGTCTACG GCCTGATTCC AAGCCAGCCG AACACCGTGC CGGGCAGCTA TGCCGACACC GTGACCGTGA CGGTGACGTA TTGA
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Protein sequence | MKAFALKTAL AAVLCSAAAV ASAASTSSSF GVSTTVNAIC VINSAGALTF TAFDPSQGAQ ASTSSISVNC SNTTPFNISL DAGAGPSATV ASRVMTSGGN TLTYSLFQDS GHTSVWGNTV GTNTVAGTGA GMAPANAITK TVYGLIPSQP NTVPGSYADT VTVTVTY
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