Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2633 |
Symbol | pabB |
ID | 1221480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2834813 |
End bp | 2836693 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637239034 |
Product | putative PARA-aminobenzoate synthetase component I protein |
Protein accession | NP_520754 |
Protein GI | 17547352 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [COG0147] Anthranilate/para-aminobenzoate synthases component I |
TIGRFAM ID | [TIGR00553] aminodeoxychorismate synthase, component I, bacterial clade |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.10225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTGC CAGATGCCGG CGCGCCGTTC GCGCTGCTGG ACGATGCCAC CTCGGCCGGT GCGCCATGCT CGCGCTGGTA CACCGGCTAT GCCGGCGAGA TCGTCCGGCC GCCGGGCACG CTGGCGGGGC TGGACGATGC GCTGCGCGCG GCCTGGGCCG ACGGTTTGCA TGCGCTGGTC CTGGCCCCGT ACGAATTCGG CCGGCCGCTG GTCGGCTTGT TATCGGCCAT GCCGGCGTCC GCTCGGTTGC CCGGCCACGA CGGCTGTCTG CGCGTGCTGC TGTTCCGCTC GATGCAGGTG CTGTCGGCGG CCGAGGTCGA TGCGCTGTTC GACGCGTGGC CCGAGGCCGG TAGCGCTGCC GGCCTGTTCG ACTGTGCGGC CAGCGTCGAC CATGACGCCT ATGTTCACGC CATCGCCCGC ATCCAGGACT GGATTGCCGC GGGCGATACC TACGAAGTCA ATTACACGTA CCGCCTGCGC ATGACGGCGT TCGGCGCGCC GGCCGCGCTG TATCGCCGCC TGCGCGCGCG CCAGCCGGTG CCGTACGGGG CGCTGATCGG ACTGCCGGAA GGCGGGGCAA TCCTGTCGTG CTCGCCGGAA CTGTTCTTCT CGCACCGCGC GGGCACCCTC GTCGCGCGGC CGATGAAGGG CACCGCGCCC GCCAGCGGCG ATCCGGAAGT CGACCAGGCG CGCGCCGCCG CGCTCGCCGC CGACGAGAAG AACCGCGCCG AAAACCTGAT GATTGTCGAT CTGCTGCGCA ATGACCTGGG CCGGCTCGCA CGGCCGGGCT CGGTGCGCGT GCCGACGCTG TTCGAGGTGA CGCCGTACGG CAGCGTGCTG CAGATGACCT CCACGGTGCA GGCGGAGATT CCGCCCGAAA CCGGCCTGGC CGACTGCCTC GCCGCGCTGT TTCCGTGCGG CTCCATCACG GGCGCGCCCA AGCGCCGGAC CATGGAGATC ATCGACGCGC TGGAGCCGCA GCCGCGCGGC TTCTACACCG GCGCGATCGG CTGGATCGAC GCGCCCAGCG GCGATCGCGC GATGGGCGAC GCATGCTTTT CCGTGGCGAT CCGCACGCTG GTGCTGGGGG CGCCCGGCAC CGACGGCCTG CATTCGTGCG AGCTCGGCAT CGGCTCCGGC ATCGTGCACG ACAGCGCCGC CGACGAGGAA TACGCCGAGT GCCGGCTGAA GGCGCGCTTC GTCACCGCGC TCGATCCGGA CCTGTCGCTG TTCGAGACGA TGCGGGCGAC GCGCGCCGAA GGCGTGCCCT TGCTGGAGCG GCATCTGGCG CGGCTGGCGC ATTCCGCCCG TGCGTTCGGC TTCGGTTTCG ACAGGGATGC GCTGGTGCGC GAGGTGGCGC GCGCGTGCGC CGCGCTGCCG GAGGCCGGCG CCCACCGCAT GCGCCTGTCG CTGCGGCACA GCGGCGCATT CAGCGTCACG GCGGCGCCGC TGCCGCCGCT GCATGCCAGC TGGAATGCGC CGGTGCGCCT GCGCGTCGCG CCGCAGGCAC GCGAGGCCGC GCACAGCCTG CCCCATCACA AGACCAGCCT GCGCGCCGCC TATGACGCAG CCTGGCAGGC CGCGGAGCGC GAGGGCGCGT TCGATGCCGT GTTCTTCAAT GCCGACGGTA CCCTGGCCGA GGGCGGCCGC AGCACGGTGC TGGTCAAGCT GGAGGGGCGG TGGTGGACGC CGCCGCTGTC GGCCGGCGTC CTGCCGGGCG TGATGCGCGC CGTGCTGCTG GAGGACGCGC GGCCGTGGCT CGGCGCGCCC TTGCATGAAC GCGTGCTGAC CCGTGCCGAC GTCGTCCGCG CCGAGGCCAT CGCCGTCTGC AACGCGCTAC GCGGCGTGGT GCCCGCGCAT TTCGAGCCGC CCGTCGCTTA G
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Protein sequence | MPLPDAGAPF ALLDDATSAG APCSRWYTGY AGEIVRPPGT LAGLDDALRA AWADGLHALV LAPYEFGRPL VGLLSAMPAS ARLPGHDGCL RVLLFRSMQV LSAAEVDALF DAWPEAGSAA GLFDCAASVD HDAYVHAIAR IQDWIAAGDT YEVNYTYRLR MTAFGAPAAL YRRLRARQPV PYGALIGLPE GGAILSCSPE LFFSHRAGTL VARPMKGTAP ASGDPEVDQA RAAALAADEK NRAENLMIVD LLRNDLGRLA RPGSVRVPTL FEVTPYGSVL QMTSTVQAEI PPETGLADCL AALFPCGSIT GAPKRRTMEI IDALEPQPRG FYTGAIGWID APSGDRAMGD ACFSVAIRTL VLGAPGTDGL HSCELGIGSG IVHDSAADEE YAECRLKARF VTALDPDLSL FETMRATRAE GVPLLERHLA RLAHSARAFG FGFDRDALVR EVARACAALP EAGAHRMRLS LRHSGAFSVT AAPLPPLHAS WNAPVRLRVA PQAREAAHSL PHHKTSLRAA YDAAWQAAER EGAFDAVFFN ADGTLAEGGR STVLVKLEGR WWTPPLSAGV LPGVMRAVLL EDARPWLGAP LHERVLTRAD VVRAEAIAVC NALRGVVPAH FEPPVA
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