| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2624 |
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| Symbol | |
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| ID | 1221471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2827245 |
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| End bp | 2828315 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637239025 |
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| Product | ABC transporter permease |
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| Protein accession | NP_520745 |
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| Protein GI | 17547343 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.138735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.255995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC CGTTGCTGAC GCAGGACACC AAGCGCACGC TCGCGTGGAT CGCCGTGGCC
GTCGCCTTCC TGGCCCTGCT CAAACTGCTG GCGCCGACGC TCACGCCGTT CGTGTTCGCG
GGCATCCTAT CGTACATCCT GCATCCCGGC GTGGAATGGC TGCAACGGCA CCGCGTGCCG
CGCGTGCTGG GCGTGTTCCT GATGATCCTG CTGCTGACAG TGGTGGCCGT GGCGCTGATG
CTGCTGATCC TGGCGGTGCT GCAGCGGGAG ATTCCCGCCA TCCGCGAACA GCTGCCCGGC
ATGCTGTCCA AGCTGAACGC GGCGGTCACG CCCCGGCTGG CGGAGATGGG CGTGCACGTG
CGCTTCGACT TCCCCGGCCT GCGCAAGCTG CTCACCGAAC AGCTCGCCGC CAGCCCGGAG
GACGTGATGT CCACGGCGCT GAACTACCTG CGCGTGTCGG GCTCGGCCGC GGTGCAAGTG
CTCGGCATCG TCTTCCTGGT GCCGATCGTG ATGTTCTACC TGCTGATGGA CTGGAACATG
CTGATACGCC GGCTGGAAGG CGCCGTGCCG CGCCGCTGGA TCAGCAAGAC GCGCGAGCTG
GCGGCCGAGA CCGACGGCCT GCTGTCGCAA TACCTGCGCG GACAGATCAT CGTGATGCTG
GTGCTGGCGG CGTATTACTC GGCCGGGTTG GCGCTGGCCG GCTTCGATGT GGCGCTGCCG
ATCGGCATCT TCACCGGGCT GGCGGTGTTC ATCCCCTACA TCGGCTTCGG CATCGGCCTG
ATCCTGGCGA TCCTGTCGGC GCTGCTGCAA TTCGGCAACC TGTACGGCCT GCTGGCGGTG
GCGGTGGTCT ACGGCGTCGG CCAGGTGCTG GAAGGTTTCT ACCTGACGCC GCGGCTGGTG
GGCGAGCGCA TCGGGCTGCA CCCGCTGGCG GTCATCCTCG CCCTGCTGGC TTTTGGCCAA
TTGTTCGGAT TTTTCGGTAT CCTGCTGGCC CTGCCGATCA GCGCCGTGCT GCTGGTCGGC
CTGCGGCAGA TCCGGCAGCT CTACCTGGGC AGCAAGCTGT ACCGCGACTA A
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| Protein sequence | MNAPLLTQDT KRTLAWIAVA VAFLALLKLL APTLTPFVFA GILSYILHPG VEWLQRHRVP
RVLGVFLMIL LLTVVAVALM LLILAVLQRE IPAIREQLPG MLSKLNAAVT PRLAEMGVHV
RFDFPGLRKL LTEQLAASPE DVMSTALNYL RVSGSAAVQV LGIVFLVPIV MFYLLMDWNM
LIRRLEGAVP RRWISKTREL AAETDGLLSQ YLRGQIIVML VLAAYYSAGL ALAGFDVALP
IGIFTGLAVF IPYIGFGIGL ILAILSALLQ FGNLYGLLAV AVVYGVGQVL EGFYLTPRLV
GERIGLHPLA VILALLAFGQ LFGFFGILLA LPISAVLLVG LRQIRQLYLG SKLYRD
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