Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2515 |
Symbol | |
ID | 1221362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2721369 |
End bp | 2722577 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637238916 |
Product | hypothetical protein |
Protein accession | NP_520636 |
Protein GI | 17547234 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0603316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00307837 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGCAAGC GCATCGCAAT CGAACACCTG CAGGTCGGCA TGTACCTGGA GGAATTTGTC GACTCATGGC TGGACCACCC GTTCTGGCGG GCCCGCTTTC GCGTCGAAGA CACGGCCCAG CTGCAGCGCC TGCGCGCGAG CGGCATCCGC GAGGTGTGGA TCGATACCTC GCGCGGCAAG GACGTCGCCG CCGGCGCGGC TGCGCCCGCA GCGGCCGACA TGCCGGCGCC CCCGCAGCCG CAGCTGGAAA CCGCCATTGC GCCGCGCCCG GCCACGCTCG CCGACGAGAT GCGCCGCGCC GCGCGCATCA TCGACAAGGC GGGCATCGCG GTCCAGGCCA TGTTCGCCGA GGCGCGCATG GGGCGGACCA TCGAAGCACG CGATGCGCAG CCGCTGGTGG AGGCCATCTC CGGCTCGGTC GACCGCCACC CCGGCGCGCT GGTCAGTCTG GCGCGCCTGA AGACCAAGGA CCGCTACACC TTCCTGCATT CGGTGGCGGT CTGCGCGCTG ATGGTGGCGC TCGGCCGCCA GCTCGGCCTG TCCGATGACG AAGTGCGCGA CGCCGGGCTG GCCGGGCTGC TGCACGACAT CGGCAAGATC GCGATTCCGC CCGAGGTGCT GAACAAGCCG GGCGCGCTCA CCACCGACGA GTTCCGCCAC GTGATCGGGC ATCCGAAGGC CGGATACGAC ATCCTGGTCG GTGATCCCAG CATGCGCGAC ATCGCGCTCG ACGTCTGCCT GCACCATCAC GAGCGGATGG ACGGCACCGG CTATCCGCAC AAGCTGGCCG GCGAGAACAT CTCGCTGTTC GCCCGCATGG GCGCCATCTG CGACGTCTAC GATGCGGTGA CCTCCGACCG GCCCTACAAG AAGGCATGGG AAGCCGCCTA TGCGATCCAG CGCATGGTGG AATGGCGCGG CAACCATTTC GACCCGATGG TGTTCCAGGC CTTCGTCAAG AGCGTGGGCA TCTATCCGAC CGGCTCGCTG GTGCGGCTGC GTTCGGGTAG GCTGGCGGTG GTCATGGAAC ATGCGTCCGG CGCATTGCTC TCGCCCACGG TCAAGGTATT CTTCTCGATA TCCTCGGGCA CGCGCATCAC GCCCGAAGTC ATCGACCTGG CGCAGACCGG CGACCAGATC GTCTCGCGCG AAGAACCCGG CGACTGGGGC CTGACCGACC TCCACGAACT TTGGATACAC GGCGACTGA
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Protein sequence | MRKRIAIEHL QVGMYLEEFV DSWLDHPFWR ARFRVEDTAQ LQRLRASGIR EVWIDTSRGK DVAAGAAAPA AADMPAPPQP QLETAIAPRP ATLADEMRRA ARIIDKAGIA VQAMFAEARM GRTIEARDAQ PLVEAISGSV DRHPGALVSL ARLKTKDRYT FLHSVAVCAL MVALGRQLGL SDDEVRDAGL AGLLHDIGKI AIPPEVLNKP GALTTDEFRH VIGHPKAGYD ILVGDPSMRD IALDVCLHHH ERMDGTGYPH KLAGENISLF ARMGAICDVY DAVTSDRPYK KAWEAAYAIQ RMVEWRGNHF DPMVFQAFVK SVGIYPTGSL VRLRSGRLAV VMEHASGALL SPTVKVFFSI SSGTRITPEV IDLAQTGDQI VSREEPGDWG LTDLHELWIH GD
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