| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2452 |
|---|
| Symbol | |
|---|
| ID | 1221299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2658433 |
|---|
| End bp | 2659002 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637238853 |
|---|
| Product | putative endonuclease protein |
|---|
| Protein accession | NP_520573 |
|---|
| Protein GI | 17547171 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGACGC GCGGGCTCGG CCTGGCGCTG GCCGCGTGGC TGGCGCTCGC CGGCGGCGGC
ACCGCGCTGG CCCGCGTCGA GCCGCCGGTG CTGCCCGCCA AGGGCACCAT GCAGGCCGCC
TTCACGCCCG ATGACGACGT CGAAGGGCTG CTCGCCGACG CCATCGGCCA GGCCCGCGAG
CAGGTGCTGG TGCAGGCCTA TCTGCTGTCG AACAAAGTGA TCACCCGCGC GCTGCTGGAT
GCCCACGGCC GCGGCATCGA CGTGCGCGTG CTGGCGGACC GCGAGCAGAT GATGCGCTCC
GGCGGCAGCC GGGTGCCGGA ACTGGCCGGC GCCGGCGTGC CGGTCTCGCT GGAGGTGCGC
TACAAGAACG CGCACAACAA GGTCATCGTG ATCGATCCGC GCGGCTCGCA TCCGGTGCTG
GTGACCGGCA GCTTCAACTT CACGCAGACG GCGCAGCGCG ATAACGCCGA GAACGTCCTG
ATCGTGCGCG GCGACGCCGA CCTCGCGCAG CGCTACGCCG ACAACTGGCA GAAGCACGCG
GCCGACGCGC TGCCGTACCT GCCTGACTAA
|
|---|
| Protein sequence | MRTRGLGLAL AAWLALAGGG TALARVEPPV LPAKGTMQAA FTPDDDVEGL LADAIGQARE
QVLVQAYLLS NKVITRALLD AHGRGIDVRV LADREQMMRS GGSRVPELAG AGVPVSLEVR
YKNAHNKVIV IDPRGSHPVL VTGSFNFTQT AQRDNAENVL IVRGDADLAQ RYADNWQKHA
ADALPYLPD
|
|---|
| |