| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2355 |
|---|
| Symbol | hemY |
|---|
| ID | 1221201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2553684 |
|---|
| End bp | 2554877 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637238755 |
|---|
| Product | putative protein porphyrin biosynthesis |
|---|
| Protein accession | NP_520476 |
|---|
| Protein GI | 17547074 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3071] Uncharacterized enzyme of heme biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.354187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.526816 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTGGG TATTCTGGGT TGCGTTGCTG TTTGCCGCCG CCGTCGGCCT GGCGCTGTTC
ACCGAGCTCA ACCTGAGCAA CGTCGTGCTG CTTTACCCGC CGTACCGGGT GGACGTGTCG
CTGAACTTCG TGCTGGCGTC GCTGGTGCTG GTGTTTGTTG TACTGCATTT GCTGTTGCGG
CTGTTTCACC ACGTGACCGG CATGCCGGCG CGCGCGGCGG CGTACCGCGA GCGCACGCGC
ATCCTGCGTG CCTCGGCGGC GCTGCGCGAT GCGATGGAAA GCCTGTTCGC CGGCCGCTTC
GGCCGCGCCG AGCGCCTGGC GCGCGAAGCC CAGGCATGGG AGCCGCAACG CGAGACCGCC
GCCCTGATCG GCGCCCGCGC GGCCCACCGC ATGCAGGAGA CCGACCGCCG CGACGCCTGG
ATGGCCGAAG TGACCTCACC CGACCGCGAG CAGGCCAAGC TGGTATCGAT GGCCGAACTG
CTGGTCGACG CCCGCGATGC CGATGGCGCG CTGGAGAAGA TCGCGCAGCT GCAGGCGCAG
GGCGCGCGGC AGATCCAGGC GCAGCGCATC GCCCTGCGCG CGCACCAGCA CCTGAAGAAC
TGGAACGAGG TGCTGCGCCT GACGCGCGCG CTGGAAAAGC GCAACGCGAT CCACTCGGTG
CTGGCCGCGC GCCTCAAGCA GATGGCCTGC GAGACGCTGC TGCAGGAGCG CCGCCACGAC
ACCGACGCCC TCAACGACTT CTGGCGCGAG TTGACCACGG AAGAGCGCCG CTCGCCGCGC
ATCGCTTCGC AGGCCGCGCT GTACTTCGCA CAGCTCGGCC GCACGGACGA GGCCAAGCGC
ATCGTCGAAG ACGCCCTGAG GGCGCACTGG GATGGCCGCC TGATCCGCCG CTATGCCGAT
TGCGCCGTGC CCGGCAAGGC GCTGCCGCTG ATCCAGCAGG CCGAGAAATG GCTGGCCCAG
CATCCGGTCG ATGCGGACCT GTTCTACACG CTGGGCATGC TGTGCTTCAA GGAGCAGCTG
TGGGGCAAGG CGCAGTCGAG CTTGGAATCC GCGCTCAAGT ATGCCGATGC CGATCACCAC
GGCAATCTGC GCGCTCATGC GCACCTGGCG CTGGCGCAGC TCTATGAGCA GACCGACCGC
CAGGAAGAGG CGCAGCGCCA CTTCCGGCAG AGCGCGCTGC TGGCGGTCAA GTAA
|
|---|
| Protein sequence | MRWVFWVALL FAAAVGLALF TELNLSNVVL LYPPYRVDVS LNFVLASLVL VFVVLHLLLR
LFHHVTGMPA RAAAYRERTR ILRASAALRD AMESLFAGRF GRAERLAREA QAWEPQRETA
ALIGARAAHR MQETDRRDAW MAEVTSPDRE QAKLVSMAEL LVDARDADGA LEKIAQLQAQ
GARQIQAQRI ALRAHQHLKN WNEVLRLTRA LEKRNAIHSV LAARLKQMAC ETLLQERRHD
TDALNDFWRE LTTEERRSPR IASQAALYFA QLGRTDEAKR IVEDALRAHW DGRLIRRYAD
CAVPGKALPL IQQAEKWLAQ HPVDADLFYT LGMLCFKEQL WGKAQSSLES ALKYADADHH
GNLRAHAHLA LAQLYEQTDR QEEAQRHFRQ SALLAVK
|
|---|
| |