Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2343 |
Symbol | |
ID | 1221189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2542450 |
End bp | 2543115 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637238743 |
Product | hypothetical protein |
Protein accession | NP_520464 |
Protein GI | 17547062 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.160848 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCG CCCACCCTCC CGCCTCCAGG CTCGACCTGA CCGACCTGGC CGCCCTGCGC GACCAGCTCA AGCACGAGAC CGAGCAGCGC GAGGCCGAAC GCCAGCGCGC CGAAGCCGCC GCGCGCCAGG CCGAAGCGGA AGCCGACCTG TTCCGCGCCA GCATCGGCGA AGTGAGCGCG CTGCGCCAGG GCAAGCGGGT CGAGCACCCG CGCACGCCAC CCGCGCCGCA GCCCGTGCAC TCCCGCGCCG AGGAACAGCG CGTACTGCGT GCCTCGCTGT CGGACGAATT CGACGTCGAC AACCTGCTCG ACACCGACGA CACCCTCTCC TACCGTCGCC CCGGCATCGG CGAGGATGTG CTCAAGAAAC TGCGCCGCGG CGAATGGGCC ACGCAAGACC AGATCGACCT GCACGGCCTG CGCCGCGACG AAGCCCGCGA GGCGCTGGCC GCCTTCCTGC GCCGCGCCGT GCAGCGCGGC ATCCGCTGCG TGCGCGTGGT CCACGGCAAG GGCCTGGGCT CGCCCGACAA GGCGCCCGTG CTCAAGGGCA AGGTGCGCTC GTGGCTGGTG CAGAAAGAGG AAGTGATCGC CTTCGTCGAG CCGCGCAACA CCGCCGGCGG CGCGGGCGCC GTGCTGGTGC TGCTGCGCCA GCCGCACGGG TCCTGA
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Protein sequence | MKRAHPPASR LDLTDLAALR DQLKHETEQR EAERQRAEAA ARQAEAEADL FRASIGEVSA LRQGKRVEHP RTPPAPQPVH SRAEEQRVLR ASLSDEFDVD NLLDTDDTLS YRRPGIGEDV LKKLRRGEWA TQDQIDLHGL RRDEAREALA AFLRRAVQRG IRCVRVVHGK GLGSPDKAPV LKGKVRSWLV QKEEVIAFVE PRNTAGGAGA VLVLLRQPHG S
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