| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2275 |
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| Symbol | |
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| ID | 1221120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2465825 |
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| End bp | 2469823 |
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| Gene Length | 3999 bp |
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| Protein Length | 1332 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637238674 |
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| Product | putative signal peptide protein |
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| Protein accession | NP_520396 |
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| Protein GI | 17546994 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.747058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGTCTG CTGATCTGGC GCCCCGCGAA CGGCTGCTGC CGCCCTGGCT GATCGGCACG
CTCGGCGGGT TCGTCGCGCT GGCGCTTGCC ATGATGTTTC CGCGCGAGCG CCTCGAGACG
CGGCTGCTGG AAGGCGGCAA GGTGGATGCC CTGTCGATGG CCTACCTGGA AGCCTGGCTG
CGCGTGCGTC CGAACGACGG CGAGTTCCTG GCCGTGCTGG CGGCCCAGTA CGTGCGCACC
GGCCGCCTCG ACGAGGCCGA GGCGATGCTG GCCCGCATGC GCACGCTGCA CGACAAGGCC
ATCGGCCGCG AAGCCCTGCT GCTCGACATC GCCATCCGCG AGCAGCGTGC CTATGCGCTG
CAGCCGGGCG ATGCGCGCCG CAAGGCCTAT CTGGACGAGC TGCGTGGTTT GCTCGGCCAG
GCGCTCGACT ACCGCTGGAC CGCGTCCGAG ATGGAAGTCC TGGCCGGCCA GGCGCGCGGG
CTGGATGCCG GCGCGATTGC AGCCCGGTTC TACCAGCGGC TGTCCAAGCA GGACCCGTCG
CGCGCCGCGC AGTGGCAGTC CCGCTCCGCC GAGATCGCGC TGGGCGTGGG GGACTATCGC
GCCGCCGCGG CGGCGAATTT CGCGGCACAG GCGGCGGCTT CGTCGCTCGA GGAGCGGCGC
CGGTATTTCA TGGGCGGCCT CAAGGCGTTG CAGGCCGGCG GCCTGCTGGA CGAAGCCATG
CGCGAGGCGC AGCAGCGCGC CGGCCCGCTG ATCGACGATC AGGAGACCCT GCGCTTCCTG
ACGCGGCTGG CGATGGCGTG CAATCGTGCC GATCTGGCCG ACTACTACGC GCGCCGGCTG
CTGCACCTGT CCTGGCAGGC GGCGCCGGAC GCGGCCATCG CGCTGGCGGA GGGTGCGGCG
CGGCACGACT GGGTGTTCGG CGGGCGGCCG CAGCCCCTGC CGTCGCCGTC CGAGGCGGTG
TTCCTGGATG GGGTCGAGGG CGTGGCGCGT CGCCCGCGCG GCGCCGCGCG CATCCGCCGC
GTGGCCGATG CGGCCAGCGC GCCCGCCGCG CCGCCCGCGG GCGCCCAGGC CGCCGCGCAC
GGCATTGCGC CGTTCAATGC GGAAGACTAT GACCTGGCTT TCCGCGTGTT TCTCGGCAGC
GGCAACCTGA ACGATGCCAT GCGCGTGGCC GAGGCCGCCG TGCGCCAGCG CCCCGACCTG
AAGCTCTGGA CCGAGCGCGC CGCCCAGGTG GCCGAATGGA ACCACCAGCC GATGGTTGCG
CTGCAGCACT GGCTGGCCTA CGCCCAGGCC ACCGGCGACG ACGTGGCTTG GCGCAACGTG
CTGCGCCTGG CGCCCGCGCT CAATGAAGAC CACGCCTACC TGGCGGCGCT GCGCCACAAG
GCCGGCAGCC AGCCGGCCGA CATGAAGCTG CTGGACCAGA TCGTCGCGGC CTACGAGCGC
CTGGGCGAGC CGGCCGAAGG GCTGGCCTAC CTGGACAGCG TCGCGCGCGG CCCGAACCGG
CAGGCCGTGC TGGAGCGCTA CGCCCAACTG GCCGAGCGGG CCGGCAAGGA CGACCTGGCC
TATGCCGGCT ACCAGCGCCT GCAGCGGGAA TTCGGCCCCC ACGCCGGATA CGCGCTCAAG
CTCGCCAACA TGCTGTACGT GCGCGACCAG TTCGAGCTGG CGCTGGCGGC CATGCAGACG
GCCGAGCACA TCGCCTCGCC GACCGACGAC CTCTACTGGC GCACCTTCGC CCAGCTCGCC
CGCCTGAACC AGCGCGACGA CCTGATGCGC GAGGCCTACC GCCAGTTGCT GATCGGCGGG
GGCGCGGTGG TCGACGACCT GTCGACGATG GTCGAGTTCT ACGATGCCAG CCCGATCGAT
GCCGGCCGGC TGGCCGAGCT GGCCTATCGC AAGGACGGCG GTCCGATTCA CCTGCAGCGG
GCGCTCTATT ACTACACGCG GGCGGGGGCC TTCCACCGCG TCGAAGGGCT GCTTGCCTCG
CTCACGCCGG CGCAGCGCGC CGCGGCCGAG CGCTCCGCCG GCGTGCTGGC CGCCCGCGCC
GAGTACTACC GCCAGCGCGG CCAGTGGGAC GCCGCCATGC GTGATTTGCG CTGCGCGGTT
TCGCTGCCCG ATGCCGGCAG CGACGTGAAG GCGGCGCTGC TGTGGAGCCT GATCGATTCC
GGCCAGATCG CGGAGCTCAA GCGCGCGCTG GCCCACTGGC GGGGCGAGGC GGAAAACGAC
TCCGTCTACT GGGGCGCCTA TGCCGCCGCC GGCCTGCGGC TGGCCGATCC CGGCCTGGCG
CTGCGCTTTC TCGGCCGGCA GGGCAAGTCG ATGCGCAACG ACCCGCTCTG GCTGCTGGCC
TACGCCGATG CGCGCGAGAT GGCGGGACAG GCCGATGTGG CGTGGCGCCT GCGCCGCGAG
GCCTGGCGGT TGCTGTGGCG AGGGGAGGAG GCCGGCGCCG GGGCCCCGGG GGAACGCCGG
GCCGCCGCGT CCGACGAGGT GCAGCCGGCT GCGCTGGAGG ACGGCGCGCG CGCCGAACTG
CGTGCCCGCC GCGCCACGCT GGCGCAGACG TTCGGGTCGG GCGACCTGGC CCAGCGCCTG
CTGATCGAGC TGCTGCGCGA CGATCGCCGC GAAACCCGCG CCGCGCGCGA GGGCGGCCGC
GCGGCCATCG CCGGGTCGGA GCTGGGCGAC CTCGATGTGC TGCCGCCGGA GCCGCCAGAA
TCGCCTGCCG CCTCGCGCAA TGCGGCCCGC GCCAGCGACC AGCTGGTGTC CGCCATCGCC
AAGGAGGCCG CGCTGGGCTG GGCCCTGTCG CAGGAGGCGA ACGACCTGGC GCGCGCCTGG
CTGCTGCAGC AGTACGCTCG TGGCGCGGCG CGGCCGGCCT ACGCCGAGAT ATCGATCGCC
CTGGCCGAGC GCGACCTGCC AACCCTCAAC CGCTTGCTGG ACGACACCCC GGACCGCCTC
CCGCTAGCGG CCCGCATCGA CGCCAACGCG ATGACGGATC GCCTGGGCGA GGCGCAGCGG
CTGGCCTTCG GCGGCCTGAC CACCGCGCCG GACGAACCGC AGCTGCACCA GCGCGTCGAA
GAGACGCTGC TGGCCAACGC GCAGGCGCTG GAGCCGCGCG GGACCTGGTA TAAGCAGGCG
CCGCTGACGT ACTTCGAGAG CAGCGCGGCC GCCGGCACCC GGCTGACGGA TCACTACAGC
ATGCTGCTGC GTGCCACCCA GCGCAACCAG CGCTCCATCG ACGCTCAGCA GCTGACCGGC
GTGCCGGCGC AGGACCGCAG CGTCGACTGG ATTTCGCAAT ACCTGACGCG GGATGCGCGG
TGGAAGGGCA CTGTCGGCTG GCGCCAGGGT CTGGCATCCT TCACGACGTT CCGGCTGGAC
GGCCAGCTGG GGCAGACCGG GCCGGTGGTC ACGGAGTTCG CGGTGGGCCG CAATCAGCCG
GCCAGCGAGA CGCCGCAGCT GCGCGTGGGC GGCGTCAAGG ACATCGCGAC GATCGGCGCC
AACTGGCGGT TCACGCAGCG ACAATACGTC CGAGCCCGGG TGGAGGGCGA CCGCTTCTAC
GGTCAGGACC GCTCCTTCCT CGGCAGCGGC ACGGTGTTCG ACGGCGAGAT CGGCCACCGC
TTCCGGGTGG AGTATCCCGA CTATACGATC CGGCTGACCG GCACGTATGC GCGGTACAGC
GCATCGGGGG CGCCGGGCGC GCCGCTCGGC CGGCTGCTGC CTGCCGGGGC GGCGATGTCG
GCCGAGCAGT TCGTGCCGCG CTCGTTCGCG CAGTACGGGC TGCTGTTCGG TTTCGGCACC
GACTACCTGG AGCGCTATGC TCGTGCCTGG CGGCCGTTCC TGGATGCGGG CATGCTGCAC
GACAATCGCC AGGGCTGGGG TGTCCAGCTC CAGGTGGGCG CGGCCGGCAG CGTCCTGGGC
AACGACCACC TGGCGCTGTA TATCGGGCAT GCCTCGATCA CGCGCGCCGG CACGTCGCCC
ATGACCGAGA TCGGCCTGCG CTACCGGTGG CTGTACTGA
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| Protein sequence | MWSADLAPRE RLLPPWLIGT LGGFVALALA MMFPRERLET RLLEGGKVDA LSMAYLEAWL
RVRPNDGEFL AVLAAQYVRT GRLDEAEAML ARMRTLHDKA IGREALLLDI AIREQRAYAL
QPGDARRKAY LDELRGLLGQ ALDYRWTASE MEVLAGQARG LDAGAIAARF YQRLSKQDPS
RAAQWQSRSA EIALGVGDYR AAAAANFAAQ AAASSLEERR RYFMGGLKAL QAGGLLDEAM
REAQQRAGPL IDDQETLRFL TRLAMACNRA DLADYYARRL LHLSWQAAPD AAIALAEGAA
RHDWVFGGRP QPLPSPSEAV FLDGVEGVAR RPRGAARIRR VADAASAPAA PPAGAQAAAH
GIAPFNAEDY DLAFRVFLGS GNLNDAMRVA EAAVRQRPDL KLWTERAAQV AEWNHQPMVA
LQHWLAYAQA TGDDVAWRNV LRLAPALNED HAYLAALRHK AGSQPADMKL LDQIVAAYER
LGEPAEGLAY LDSVARGPNR QAVLERYAQL AERAGKDDLA YAGYQRLQRE FGPHAGYALK
LANMLYVRDQ FELALAAMQT AEHIASPTDD LYWRTFAQLA RLNQRDDLMR EAYRQLLIGG
GAVVDDLSTM VEFYDASPID AGRLAELAYR KDGGPIHLQR ALYYYTRAGA FHRVEGLLAS
LTPAQRAAAE RSAGVLAARA EYYRQRGQWD AAMRDLRCAV SLPDAGSDVK AALLWSLIDS
GQIAELKRAL AHWRGEAEND SVYWGAYAAA GLRLADPGLA LRFLGRQGKS MRNDPLWLLA
YADAREMAGQ ADVAWRLRRE AWRLLWRGEE AGAGAPGERR AAASDEVQPA ALEDGARAEL
RARRATLAQT FGSGDLAQRL LIELLRDDRR ETRAAREGGR AAIAGSELGD LDVLPPEPPE
SPAASRNAAR ASDQLVSAIA KEAALGWALS QEANDLARAW LLQQYARGAA RPAYAEISIA
LAERDLPTLN RLLDDTPDRL PLAARIDANA MTDRLGEAQR LAFGGLTTAP DEPQLHQRVE
ETLLANAQAL EPRGTWYKQA PLTYFESSAA AGTRLTDHYS MLLRATQRNQ RSIDAQQLTG
VPAQDRSVDW ISQYLTRDAR WKGTVGWRQG LASFTTFRLD GQLGQTGPVV TEFAVGRNQP
ASETPQLRVG GVKDIATIGA NWRFTQRQYV RARVEGDRFY GQDRSFLGSG TVFDGEIGHR
FRVEYPDYTI RLTGTYARYS ASGAPGAPLG RLLPAGAAMS AEQFVPRSFA QYGLLFGFGT
DYLERYARAW RPFLDAGMLH DNRQGWGVQL QVGAAGSVLG NDHLALYIGH ASITRAGTSP
MTEIGLRYRW LY
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