Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2271 |
Symbol | |
ID | 1221116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2461185 |
End bp | 2462774 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637238670 |
Product | hypothetical protein |
Protein accession | NP_520392 |
Protein GI | 17546990 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.237917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG AATTCCCGCG TGCCGAATCC GCCGATGTCG CACTGCTGCT TGAAGGGACC TTTCCCTATG TGAGCGGCGG GGTGTCGAGC TGGGTCAACC AGATGATCCG GGCCTTTCCG GACATCCGCT TCGCCCTCGT CTTCATCGGC AGCCGCCGCG AAGACTACGG CAAGCCGGTC TACGCCCTGC CCGACAACGT GGTGCACGTG GAGTGCCACT ACCTGTACGA CTTTCCCGCG CCGCCGCTGG TGCAGGCCAG CGGCGGCGAT ACCCGGGCCT TCGATCGCTC GCGCAAGCTG CATGACGCGC TGCGCGACCC GGCCAACCAC GGCGAGACCG CCGAGCTGAT CCGCGCCTCG ATCGCCGACC TGCGCGAGGA CGGCCCGCTG GCCGAGGAGC AGTTCCTCTA CAGCCACCGC GCCTGGGAGA TGATGACGGA CTACTACCGG CGCTACTGCA CCGACCCGTC GTTCACCGAC TACTTCTGGA CCGTGCGCAT CATGCACAAG CCGCTGTGGA TGCTGGTGCG CATTGCCGAG AACCTGATCC CGGTGAAGGT GTTCCACACC ATCTCCACCG GCTACGCGGG GTTCCTGGGC GCGCTGCTGC GCTACCGCTG GGGACGGCCG CTGCTGGTCT CGGAGCACGG CATCTACACC AAGGAACGCA AGATCGACCT GTTCCAGAGC CAGTGGATTC GCGACAACCG CAGCATCTTC GAGAAGGACA TCTCGCAGAT CAGCTATTTC CGCGACCTGT GGGTGCGCTT CTTCGAGACC ATCGGCCGGG TCTGCTATGA CGCCGCCGAA GACATCATCT CGCTGTACGA GGGCAACCGC CTGCGGCAAG TGCTCGACGG CGCGCCGGCG CAGAAGACCC GCAACATCCC CAACGGCATC AACCTGCCGC GCCTGGCCGC GCTGCGCGAC CGGCGCGGGC CCAGCGTGCC GCGCGTGATG TGCCTGATCG GCCGGGTGGT GCCGATCAAG GACGTGAAGA CGTTCATCCG CGCCATGCTG ACCATCACGC GCGAGATGCC CGACGCCGAA GGCTGGATCG CCGGCCCGGA AGACGAAGAC CCCGACTACG CGCAGGAATG CCACAGCCTG GCCGAGAGCC TGGGGCTGGG CGAGCGCATC AAGTTCCTCG GCTTCCAGAA GATCGACGAT GTGCTGCCCA AGGTCGGGGT GCTGGTGCTG AGTTCGATCA GCGAGGCGCT GCCGCTGGTG GTGCTGGAAG GGTTTGCCGC CGGCGTGCCG TCGGTCACCA CCGATGTCGG CTCGTGCCGC CAACTGCTGT TCGGCCTGGA CGGCGACGAC GCGGCGCTGG GCGCGGCGGG CGCCGTGGTG CGCATCGCCG ACCCGGCCGC GCTGGCCGCC GAGGTGCTGA ACCTGCTGAG CGACGAGTCC CGCTGGTACG CCGCGCAGGC CGCCGGCATC GCCCGCGTCG AGCGCTACTA CACGCAGGAG ATGATGGTCG GCAGCTACCG CGAGCTGTAT GAGCGCCTGC GCGCGCAGCC GGACATGCCC ACCGGGCCGG GCGCCAAGGC CGCCGCCGCG GCGTGTCCGC ATCACCAGGG AGCGCGCTGA
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Protein sequence | MTDEFPRAES ADVALLLEGT FPYVSGGVSS WVNQMIRAFP DIRFALVFIG SRREDYGKPV YALPDNVVHV ECHYLYDFPA PPLVQASGGD TRAFDRSRKL HDALRDPANH GETAELIRAS IADLREDGPL AEEQFLYSHR AWEMMTDYYR RYCTDPSFTD YFWTVRIMHK PLWMLVRIAE NLIPVKVFHT ISTGYAGFLG ALLRYRWGRP LLVSEHGIYT KERKIDLFQS QWIRDNRSIF EKDISQISYF RDLWVRFFET IGRVCYDAAE DIISLYEGNR LRQVLDGAPA QKTRNIPNGI NLPRLAALRD RRGPSVPRVM CLIGRVVPIK DVKTFIRAML TITREMPDAE GWIAGPEDED PDYAQECHSL AESLGLGERI KFLGFQKIDD VLPKVGVLVL SSISEALPLV VLEGFAAGVP SVTTDVGSCR QLLFGLDGDD AALGAAGAVV RIADPAALAA EVLNLLSDES RWYAAQAAGI ARVERYYTQE MMVGSYRELY ERLRAQPDMP TGPGAKAAAA ACPHHQGAR
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