Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2162 |
Symbol | |
ID | 1221006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2345371 |
End bp | 2346387 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637238560 |
Product | ribonuclease Z |
Protein accession | NP_520283 |
Protein GI | 17546881 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0166615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGGCC TGTTCGACGC CCGGCTTGTC AACGATGCCT TCGGGGATCC GGGCCTCTAT CTGGATTTCC ATGACGAGCG GCGCGCCTTG CTGTTTGATC TCGGCGATCT CTCCAGGCTT CTGCCCGGCC AGCTGCTGCG TCTGTCCCAT GTTTTTGTGA CCCATACGCA CATGGATCAT TTCGCCGGTT TCGATCGGTT GCTGCGCGTG TCGCTCGGGC GCAAGGACCG TATCGTGGTG CTTGGTGGGC CGGGCTTCAT CGCGCAAGTG GGGCACAAGC TGAGCGCCTA CACCTGGAAC ATGGTGGAGC GCTACACGGA GGCATTGGTG ATCGAGGCAC GCGAGATCGG ACTGGACGGC TGGCAGCGGC GCGTGCTTTT CTCGAGCCGT CACCACTTCG CGCCCGAAGC CGGCGCGCGT CTCGAGCGCA CGGATGACGT GCTGCACGAC GAAATGACGT TTCGTGTGCG GGGCCGCTTT GTCGATCACG ACATGCCTTG CCTCGCTTTC CTGATCGAGG AGAAGGCGCG CATCGGCGTG AACAAGGATG GGCTCATGGC GCTGGGGATG ACCGCCGGCG CCTGGCTGCG CGAGTTAAAG CATGCTGTAC TCAGCGGCGC CGCCGCCGAC ACGCCGCTGC TGGTGCAATG GCGCGACCGG CATGGCGATC ACGCCAGCAC TCGGCTGGTC GGGGAGTTGT GTCAGCTGGT GCTTGATGTC GTGCCGGGCC AGCGCATTGG CTATGTCACC GACCTGCGCT ACACCGAACA AAACGTGCAG ACCCTTGTGC AGCTCATGCG TGGCGTCGAT CAGTTGTATA TCGAGAGCGT GTTCCTCGAC GAAGACAAGG CGCATGGCCT GCGCAAGAAC CACTTGACTG CCCGTCAGGC GGGGTTGATC GCACGGGCGC TCGGGGCTGG GGCTGTCGTG CCGTTCCATT TCTCGCCCCG CTACCAGGGG CACGGCTCCG CGCTGACGGC TGAGGTGCGT GCGGCCTGGG CTGGCTTGGC CGGCTGA
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Protein sequence | MHGLFDARLV NDAFGDPGLY LDFHDERRAL LFDLGDLSRL LPGQLLRLSH VFVTHTHMDH FAGFDRLLRV SLGRKDRIVV LGGPGFIAQV GHKLSAYTWN MVERYTEALV IEAREIGLDG WQRRVLFSSR HHFAPEAGAR LERTDDVLHD EMTFRVRGRF VDHDMPCLAF LIEEKARIGV NKDGLMALGM TAGAWLRELK HAVLSGAAAD TPLLVQWRDR HGDHASTRLV GELCQLVLDV VPGQRIGYVT DLRYTEQNVQ TLVQLMRGVD QLYIESVFLD EDKAHGLRKN HLTARQAGLI ARALGAGAVV PFHFSPRYQG HGSALTAEVR AAWAGLAG
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