Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2121 |
Symbol | |
ID | 1220962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2298088 |
End bp | 2298609 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637238516 |
Product | hypothetical protein |
Protein accession | NP_520242 |
Protein GI | 17546840 |
COG category | [S] Function unknown |
COG ID | [COG3195] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03164] OHCU decarboxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.205363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCAGA CCGCTGCCCC CCTCGCCCAG CTCAACGCCA TGGACACCGC GCAGTTCGTG CGCACGCTGG GCGGCATCTA CGAGCACTCG CCATGGGTGG CCGAGCAGGC CGCCGGGCAG CGCCCGTTCG CCTCGGCCGA CGCGCTCGCG GCCGCCATGC GCCGTGCCGT CGACGGCGCC GGCGAAGGCC CGCAGCTCAA GCTGGTGCGC GCCCACCCGG AACTCGCAGG CAAGGCCGCC GTGCGCGGCG AGCTGACCGC CGAATCGACC CGCGAGCAGG CGAGCGCCGG CCTGGACCAG TGCTCGCCCG AAGAATTCGC GCGCCTGCAG GCACTGAACG CGCGCTACAA CGACAAGTTC GGCTTCCCGT TCATCCTGGC GGTGCGCGGC TACGACCGGC ACGGCATCAT CGACGTGTTC GCCAGGCGCC TCGAGAACGA CCGCGCCACC GAGCTGCGCG CGTCGCTGGA GCAGATCCAC CGCATCGCCG GCTTCCGTCT GCACGACCTG ATTTCAGGCT AG
|
Protein sequence | MSQTAAPLAQ LNAMDTAQFV RTLGGIYEHS PWVAEQAAGQ RPFASADALA AAMRRAVDGA GEGPQLKLVR AHPELAGKAA VRGELTAEST REQASAGLDQ CSPEEFARLQ ALNARYNDKF GFPFILAVRG YDRHGIIDVF ARRLENDRAT ELRASLEQIH RIAGFRLHDL ISG
|
| |