Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2114 |
Symbol | |
ID | 1220955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2290499 |
End bp | 2291230 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637238509 |
Product | transcription regulator protein |
Protein accession | NP_520235 |
Protein GI | 17546833 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGAA CGAAGGTCGC CGCGGAAAGC GATGCGCAAG TGGCCGATCC TTCTGTTGAC CGGAAGGCGC TATTGAGCGA AGCGCTGCGC AGGCGGATCG TCAGCATGGA AATGGCGCCC GGCGCGGTGG TGGACGAGCT GGCGCTCAGT GAGGAATTCG GCCTCTCCCG CCCCCCCGTC CGGGAAATCA TGCGGCAGAT GGCGGCCGAG GGATACATCG ACCTCGAAGC CAATCGGGCA GCGCGCGTTT CGTCGATGAA CCACCAGTCG TTGAGGAATT TCTTCCTGGC CGCCCCGCTC ATTTACATCG CGACCACGCA ATTGGCGGCG GTGAATGCGG CACAGCACGA AATTGATGCG CTGAAGGCCA TTCAGTTGCG GTTTCGTCAG GCCATCGAAG ACAACGATGT CGAGAGCCGC GTCTTATACA ACGACCAGTT CCATCTCCAG ATCGGGGTGA TGGCTCACAA CGCCTACCTG ATGCCGAGTT TGCGCCGCAT CTTGATCGAC CACGCCAGGC TCGGAAAAAT CTTCTATCGG CATCCGACCA CCAGCGACAT GCAGGCGGAT CTCGGCAAAG CGGCCAGCCA GCACGACCAG ATCATCGAGG CGATCGAGCG CCACGATGCA AACGCCGCCG CTGACATCGT GCGCGCGCAC ATGGATCTGT CCCGTCGCCG GATGACGGAG TATGTCGCGC CTGCGGCTGT TGAGGTGCCG CTGACGTACT GA
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Protein sequence | MTRTKVAAES DAQVADPSVD RKALLSEALR RRIVSMEMAP GAVVDELALS EEFGLSRPPV REIMRQMAAE GYIDLEANRA ARVSSMNHQS LRNFFLAAPL IYIATTQLAA VNAAQHEIDA LKAIQLRFRQ AIEDNDVESR VLYNDQFHLQ IGVMAHNAYL MPSLRRILID HARLGKIFYR HPTTSDMQAD LGKAASQHDQ IIEAIERHDA NAAADIVRAH MDLSRRRMTE YVAPAAVEVP LTY
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