Gene RSc2114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2114 
Symbol 
ID1220955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2290499 
End bp2291230 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content61% 
IMG OID637238509 
Producttranscription regulator protein 
Protein accessionNP_520235 
Protein GI17546833 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGAA CGAAGGTCGC CGCGGAAAGC GATGCGCAAG TGGCCGATCC TTCTGTTGAC 
CGGAAGGCGC TATTGAGCGA AGCGCTGCGC AGGCGGATCG TCAGCATGGA AATGGCGCCC
GGCGCGGTGG TGGACGAGCT GGCGCTCAGT GAGGAATTCG GCCTCTCCCG CCCCCCCGTC
CGGGAAATCA TGCGGCAGAT GGCGGCCGAG GGATACATCG ACCTCGAAGC CAATCGGGCA
GCGCGCGTTT CGTCGATGAA CCACCAGTCG TTGAGGAATT TCTTCCTGGC CGCCCCGCTC
ATTTACATCG CGACCACGCA ATTGGCGGCG GTGAATGCGG CACAGCACGA AATTGATGCG
CTGAAGGCCA TTCAGTTGCG GTTTCGTCAG GCCATCGAAG ACAACGATGT CGAGAGCCGC
GTCTTATACA ACGACCAGTT CCATCTCCAG ATCGGGGTGA TGGCTCACAA CGCCTACCTG
ATGCCGAGTT TGCGCCGCAT CTTGATCGAC CACGCCAGGC TCGGAAAAAT CTTCTATCGG
CATCCGACCA CCAGCGACAT GCAGGCGGAT CTCGGCAAAG CGGCCAGCCA GCACGACCAG
ATCATCGAGG CGATCGAGCG CCACGATGCA AACGCCGCCG CTGACATCGT GCGCGCGCAC
ATGGATCTGT CCCGTCGCCG GATGACGGAG TATGTCGCGC CTGCGGCTGT TGAGGTGCCG
CTGACGTACT GA
 
Protein sequence
MTRTKVAAES DAQVADPSVD RKALLSEALR RRIVSMEMAP GAVVDELALS EEFGLSRPPV 
REIMRQMAAE GYIDLEANRA ARVSSMNHQS LRNFFLAAPL IYIATTQLAA VNAAQHEIDA
LKAIQLRFRQ AIEDNDVESR VLYNDQFHLQ IGVMAHNAYL MPSLRRILID HARLGKIFYR
HPTTSDMQAD LGKAASQHDQ IIEAIERHDA NAAADIVRAH MDLSRRRMTE YVAPAAVEVP
LTY