Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2102 |
Symbol | |
ID | 1220943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2277606 |
End bp | 2278370 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637238497 |
Product | transcription regulator protein |
Protein accession | NP_520223 |
Protein GI | 17546821 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAGCA TTCCATCCTC CGTTGCACAA GCGCTCCAGC AACGCATCAT GAGCGGCGAT TACGCCAGTG GCACCCGGCT GCCGCCGCAG CGTGAACTGG CGGCAAGCCT GGGGGTGAGC CGCGCCTCGC TGCGCGAAGC CCTGACCGTG CTGGAAACGC TTGGCCTCGT AGACATCCTG CCGAGCAAGG GTGTGGTGGT GCGCGGCCCG CACGCGGATG CCGAGCGCAT GCACCGCCCA TTCGCCACGC CGGCGCTCGG CACGCTGTCG CCGCGTCAAC TGATTGAGTT GCGCCTGGTG CTGGAGCCCG GCTGGACAGC GCTGGCCGCG ACTCGCATGC ATGCCGCCGG CCTGCGTCAA TTGCAGTGGC TGCAGAAGCA GCTTGCCCAT GCGCTGGAGC GCAACGACCT GCTCAGCGCG GCCGAGGCCG ACTTGCAGTT CCACCTGCTG CTGGCCGAGT TGTCAGGCAA CCCGGGCCTG GTTGCGATGG CGGGCCAACT GGAGCACGCC ATTGGCCACA GCCTGCGCCT GCCCTTTGCC AAGAACGGCG CAGACGACCA GCCCGCGCGC GAGCACGACG CCATCGTGCA GGCCATTGGC GCGGGTGATG CCACCGCCAG CGCAGAAGCC ATGCGCGCCC ATTTGATGTC GGCCGCGCGC CGCAGCGGTA TTGACCTGGC CACGCCGGTC CCCGCACCAG ACCGCACGCA CAACAATCCT GTTTCCTTTC GCTTCGACCC GACTTCTGAA GGAGTTCTTG AATGA
|
Protein sequence | MLSIPSSVAQ ALQQRIMSGD YASGTRLPPQ RELAASLGVS RASLREALTV LETLGLVDIL PSKGVVVRGP HADAERMHRP FATPALGTLS PRQLIELRLV LEPGWTALAA TRMHAAGLRQ LQWLQKQLAH ALERNDLLSA AEADLQFHLL LAELSGNPGL VAMAGQLEHA IGHSLRLPFA KNGADDQPAR EHDAIVQAIG AGDATASAEA MRAHLMSAAR RSGIDLATPV PAPDRTHNNP VSFRFDPTSE GVLE
|
| |