| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2091 |
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| Symbol | |
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| ID | 1220932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2261495 |
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| End bp | 2264026 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637238486 |
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| Product | hypothetical protein |
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| Protein accession | NP_520212 |
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| Protein GI | 17546810 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.597991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGTT TTTCCATCAC CGCCCAGTCG CTGCGCATGC TGAGCCGCGA CTGGCGCGCG
GGCGAACTGA ACCTGCTGCT GATCGCGCTC GTGCTGGCCG TGGCCGCGCT GGCCTCGGTC
AGCTTCCTCG CCGATCGCAT GCACGCCGGG CTGGAGCACG ATGCCCGCCA ACTGCTCGGC
GCCGACGTGG TGGTGGTCTC CGATCTGCCG TTGCCGCCGG ATATCGAGGC GCATGCCGCA
TCGAGCGGCC TGCGCGTCTC GCATACGGCC ACCTTCCCCA GCATGGCCAG CGCCCTGGCG
GCCGGTGCCT CGGGCGAGCC CGCGTCGCAG CTGGCGGCGG TCAAGGCGGT GGACGCCGGC
TATCCGCTGC GCGGCACCGT CAAGGTGAGC ACGGCGCGCG AAGCCGCGGG GGCGCCCGTC
CACACGATTC CGGAAGCGGG CACGGTGTGG GTCGATCCCC CCTTGCTGGA GGCGCTGGGC
GTGCGCGTGG GCGAGGCCAT CCGGCTCGGC ACGCGCACCT TCAGGATCAC GCGGGTCATC
ACCCAGGAGC TGGATCGCGG CGCCGGTTTC ATGAACTTCG CGCCGCGCGT GATGCTGCCC
ATGGCCGACC TGCCGTCCAC CGGCCTGGTC ACCTTCGGCA GCCGCGTGAC CTACCGTCTG
CTGGTGGCCG GCCCCGACGC CGCCACCGCC GCCTTCCACG CCTGGGCCGA GCATGAGCTG
CAGGCGCGCC ATCTGCGCGG TGTGCGCATC GAGTCGCTGC AGAACGGCCA GCCCCAGATG
CGTGAGACGC TGGACCGCGC CGAGCGCTTC CTCTCCCTCG TCGCCCTGCT GGCGGCGATG
ATCGCGGCGG TGGCGATCAC CATGGCGGCG CGGCGCTACA CCGCGCGGCA TACCGATGCG
GTGGCCATCA TCAAATGCCT GGGGCTGCGT CAGGGCCAGA TTCTCGGCCT CTTCGCGCTG
GAGTTCCTGG CGGTCGGCGT GATCGGCTCG GCGGTGGGCG TGGCGTTGGG CTACGGCGCG
CACTGGCTGC TGGTGGCGTC GCTGGGCAGC CTGGTGACGG TGTCGCTGCC GGCGCCGTCG
GCATGGCCGG CGCTGGTCGG CGTGGCGGCG GGGCTGGTGC TGCTGGTGGG CTTTGCCGTG
CCGCCGCTGC TGAGCCTGGT GCGCGTGGCG CCGCTGCGGG TGCTGCGGCG CGATGCCGGC
GAGCGCGCCA TCGCCACCTG GGTCGGCTAT GCGCTGGGCT CGGCGGCGTT CTTTGCGCTG
CTGGTGGTGT CGGCGCGCGA TCTCAAGCTG GGCGCGCTGA CCGCGGCCGG GTTTGGCGCC
GCCATCGTGG TCTTCGCGCT GATGGCCGCG GGCGGCCTGC GGGCCCTGGC GGCATCGCTC
GGCCGGGCGC GCGCGCTGGC GGTAGGCTGG CGCTTCGCGC TGGCCGTGCT GGAGCGTCGC
CGCGGCGTGA GCGTGCTGCA GACGGTTTCG CTCGCGGTCG GGCTGATGGC GCTGCTGCTG
CTCGCCATGA CGCGCAACGA CCTGATCCGT TCGTGGCACA ACGCCACGCC GGCCGATGCG
CCCAACCGCT TCATCATCAA CATCCAGCCC GACCAGGTGG CGCCGGTGTC GCAGGCGCTG
GCGCAGGCGG GCGTGGTGCA GCCCAGGCTG TATCCGATGG TGCGCGGCCG CCTGACGCAG
GTGAACGGCC AGGCCATCGG TCGCGATTCC TATGCCGAGT CGCGCGCGCG CAACCTGGTC
GAGCGCGAGT TCAACCTGTC CTACGCCGCC GCCCAGCCGC CCGAGAACCG CATCATCGCC
GGGCAGTGGT TCAGCGGCCA GCGGCCCGAG GCGTCGGTGG AGGAGGGGAT CGCCAAGACG
CTCAACCTGC GCCTGGGCGA TGTGCTGCGC TTCGACGTCG CCGGGCAGAC GGTGGATGCG
CCCATCACCT CGCTGCGCAA GCTCGATTGG AGCTCGATGC GCGTGAATTT CTTCGTGATC
CTGCCGCCGG TGGCGCTGCG CGACATGCCG CAGACCTACG TGACGGCATT CCGCATTCCC
GCGGGCCGCG CCGATCTGCC CGCCAGGCTG GTGCAGGCGT TTCCGAACCT GACGGTGGTC
GACACCGAAC TGATCCTGCA GCAGGTGCAG GACGTGCTGG ACCAGGTGAC GGCGGCGGTG
GAGTGCCTCT TCGTCTTTAC GCTGGCGGCC GGCGTGCTGG TGCTGTACGC GGCGCTGTCC
GGCTCGCGCG ACGAGCGCCT GCGCGATGCC GGCGTGCTGC GCGCGCTGGG CGCGGGTTCG
GCCGTGGTGC GGCAGACGCA ATATGCCGAG GTGCTGATCG TCGGCGGACT GGCCGGCCTG
ATGGCGAGCG CTGGCGCCAT CGCCATCGGC TGGGTGCTGT CGGCGCAGGT GTTCGATTTC
CCGTATCGTT TCAACCCGGC GATCCTGCCG GTGGGCATCG CGGCCGGTAT GCTATGCGCC
TTCGCGGGCG GCTGGCTGGG CCTGCGCGAG GTGCTGCGGC GCCCGGCCAT GGCCACGCTG
CGCGATGCCT GA
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| Protein sequence | MSRFSITAQS LRMLSRDWRA GELNLLLIAL VLAVAALASV SFLADRMHAG LEHDARQLLG
ADVVVVSDLP LPPDIEAHAA SSGLRVSHTA TFPSMASALA AGASGEPASQ LAAVKAVDAG
YPLRGTVKVS TAREAAGAPV HTIPEAGTVW VDPPLLEALG VRVGEAIRLG TRTFRITRVI
TQELDRGAGF MNFAPRVMLP MADLPSTGLV TFGSRVTYRL LVAGPDAATA AFHAWAEHEL
QARHLRGVRI ESLQNGQPQM RETLDRAERF LSLVALLAAM IAAVAITMAA RRYTARHTDA
VAIIKCLGLR QGQILGLFAL EFLAVGVIGS AVGVALGYGA HWLLVASLGS LVTVSLPAPS
AWPALVGVAA GLVLLVGFAV PPLLSLVRVA PLRVLRRDAG ERAIATWVGY ALGSAAFFAL
LVVSARDLKL GALTAAGFGA AIVVFALMAA GGLRALAASL GRARALAVGW RFALAVLERR
RGVSVLQTVS LAVGLMALLL LAMTRNDLIR SWHNATPADA PNRFIINIQP DQVAPVSQAL
AQAGVVQPRL YPMVRGRLTQ VNGQAIGRDS YAESRARNLV EREFNLSYAA AQPPENRIIA
GQWFSGQRPE ASVEEGIAKT LNLRLGDVLR FDVAGQTVDA PITSLRKLDW SSMRVNFFVI
LPPVALRDMP QTYVTAFRIP AGRADLPARL VQAFPNLTVV DTELILQQVQ DVLDQVTAAV
ECLFVFTLAA GVLVLYAALS GSRDERLRDA GVLRALGAGS AVVRQTQYAE VLIVGGLAGL
MASAGAIAIG WVLSAQVFDF PYRFNPAILP VGIAAGMLCA FAGGWLGLRE VLRRPAMATL
RDA
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