Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2072 |
Symbol | leuA1 |
ID | 1220913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2244697 |
End bp | 2246238 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637238467 |
Product | 2-isopropylmalate synthase |
Protein accession | NP_520193 |
Protein GI | 17546791 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA AACTGATTAT TTTCGACACC ACCTTGCGAG ACGGCGAGCA GTCGCCCGGG GCGTCGATGA CCAAGGAAGA AAAGATCCGC ATCGCCAAGC AGCTCGAGCG GCTGAAGGTG GACGTGATCG AGGCGGGGTT CGCCGCCAGC TCCAACGGCG ACTTCGAGGC CATCCGCGCC ATCGCCCAGT CGGTCAAGGA TTCCCGCATC TGCTCGCTGG CGCGTGCGAA CGACCGCGAC ATCTCCCGCG CCGCCGAGGC GCTCAAGCCG GCAGGGCAGT TCCGCATCCA CACCTTCATC GCCACGTCCG CGCTGCATAT GGAGAAGAAG CTGCGCATGA CGCCGGACCA GGTGTACGAG CAGGCCCGCC TGGCTGTGCG TTTCGCGCGT CAGTTCACGG ACGACATCGA GTTCTCGCCG GAAGACGGCA GCCGCTCCGA CATGGATTTC CTGTGCCGCG TGCTGGAAGG CGTGATCGCC GAGGGGGCCA CCACCATCAA CCTGCCGGAC ACGGTCGGCT ATGCGGTGCC GGAAGGCTAT GCCGCGCTGA TCCGCTCGGT GCGCGAGCGC ATTCCCAACT CCGACAAGGC GATCTGGTCG GTGCACTGCC ACAATGACCT GGGCATGGCG GTCGCGAACT CGCTGGCCGC GGTCAAGCTG GGCGGCGCGC GCCAGATCGA GTGCACGATC AACGGCCTGG GCGAGCGCGC CGGTAACACC AGCCTCGAAG AGGTGGTGAT GGCCGTCAAG ACCCGCCGCG ACTACTTCAA CCTCGATGTC GGCGTCGATA CCACGCAGAT CGTGCCGGCC TCCAAGCTGG TCTCGCAGAT CACCGGCTTC GTGGTGCAGC CGAACAAGGC GGTGGTGGGC GCCAACGCCT TCGCGCATGC CTCCGGCATC CACCAGGACG GCGTGCTCAA GGCGCGCGAT ACCTACGAGA TCATGCGCGC CGAAGACGTG GGCTGGACCG CCAACAAGAT CGTGCTGGGC AAGCTCTCGG GCCGCAACGC GTTCAAGCAG CGTCTGCAGG AGCTCGGCAT CGAGCTCGAT TCCGAAGCCG AACTGAACGC CGCCTTCACG CGCTTCAAGG AGCTGGCCGA CCAGAAGGCC GAGATCTTCG ATGAGGACAT CGTCGCCATC GTCTCCAACG AAGCGCAGCA CGCCGAGGGT GAGCACTTCC GCTTCGTGTC GCTGTCGCAG CGCTCGGAGA CCGGCGAGCG GCCGCACGCG CGCATCGTCT TCGTCGCCGA CGGCAAGGAA GTGACGGGCG AGGCAGAGGG CAACGGCCCG GTCGACGCGA CGCTCAACGC CATCGAGAGC AAGGTCGCCA GCGGCGCCGA ACAGCTGCTG TACTCGGTCA ACGCCATTAC CACCGGCACC CAGGCGCAGG GCGAAGTGAC GGTGCGCCTG TCCAAGTCGG GCCGCATCGT CAACGGCGTG GGCACCGATC CGGACATCGT CGCGGCATCG GCCAAGGCGT ACCTGGCGGC GCTGAACAAG CTGCAGGACA AGAGCAGCGA GAAGCTCAAT CCGCAGATCT GA
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Protein sequence | MSDKLIIFDT TLRDGEQSPG ASMTKEEKIR IAKQLERLKV DVIEAGFAAS SNGDFEAIRA IAQSVKDSRI CSLARANDRD ISRAAEALKP AGQFRIHTFI ATSALHMEKK LRMTPDQVYE QARLAVRFAR QFTDDIEFSP EDGSRSDMDF LCRVLEGVIA EGATTINLPD TVGYAVPEGY AALIRSVRER IPNSDKAIWS VHCHNDLGMA VANSLAAVKL GGARQIECTI NGLGERAGNT SLEEVVMAVK TRRDYFNLDV GVDTTQIVPA SKLVSQITGF VVQPNKAVVG ANAFAHASGI HQDGVLKARD TYEIMRAEDV GWTANKIVLG KLSGRNAFKQ RLQELGIELD SEAELNAAFT RFKELADQKA EIFDEDIVAI VSNEAQHAEG EHFRFVSLSQ RSETGERPHA RIVFVADGKE VTGEAEGNGP VDATLNAIES KVASGAEQLL YSVNAITTGT QAQGEVTVRL SKSGRIVNGV GTDPDIVAAS AKAYLAALNK LQDKSSEKLN PQI
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