| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1896 |
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| Symbol | |
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| ID | 1220736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2084602 |
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| End bp | 2085837 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637238290 |
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| Product | putative integrase prophage protein |
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| Protein accession | NP_520017 |
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| Protein GI | 17546615 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.240804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.815259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCTT CCAGACAGCT TCACCGCTTG AACGCCCTGC GCGTCGCCAA AGAAGTGGCG
CCCGGCTACC ACGCCGACGG CGGCGGCCTG TATCTCCAGA TTTCGACGAG CGGGTCGCGC
TCATGGATTT TCCGTTACTC CCTGGCGAAG CGGGCGCGGG AGATGGGCCT GGGCCCGCTG
TCCGCGATCT CGCTGGCCGA GGCCCGCGCG CAGGCCGCTC ACAGCCGCAA GCTGCTTGCC
ACCGGCATCG ACCCGATCGA GAGTCGCAAG GAACGCGAAC GCGCTGCCCA GGCCACCCCT
GACGGGTTGC TATTCCGCGA CGCCGCCCGA GACTACATCA ATGCCCACCG GGACAGCTGG
AGGAACGCCA AGCACGCCCA GCAGTGGGAA AACACCCTTG AGACCTACGC CTACCCGGTC
ATCGGCGATG TGGACGTGCG CGACATCGAC ACGGGCATGG TCGTGCGCGT ACTGCAACCC
ATCTGGATGA AGAAGGCGGA GACGGCCAGC CGCGTACGCG GGCGCATTGA GTGCGTGCTC
GATGCCGCCA AGGTCCTTGG CAAGCGCAGC GGCGAGAACC CGGCGCTCTG GCGCGGCCAC
CTGGACAAGC TTCTGCCGAA GCGCGATCGC GCCAAGAAGG TGAAACACCA TCCAGCCTTG
CCCTGGGCGG ACATCCCCGG CTTCATGCCG GAACTTGCGG AACGCGCAGC CCCGGCGGCC
CGCGTGCTGC ACCTCCTCAT CCTCACCTGT GTGCGCACGA CCGAGGCACT GGAGGCCAAG
CCGGAAGAGT TCGACCTGGA CCGGCGTATC TGGATCGTGC CGCCCGACCG GATGAAGATG
GAAAAGGAGC TGCGCGTGCC GCTGAGCGAG CCGGCGGTGC AGATCGTGAA AGAAGCGCTG
AAGACGGCCG ACGGCTACCT GTTCCCCGGC CAGAAGAAAG GCAAGCCGCT ATCGAACATG
GCCATGCTGA ACATGCTCGA CCGCATGGGC TACGAAGGGA TCACCGTGCA CGGCTTCCGG
TCGACGTTCC GCGACTGGGT GGCCGAGTGC ACCGAATACC CAGACTCGCT CGCCGAGATG
GCGCTGGCGC ACGCAGTGGA AAGCAAGGTG GAAGGCGCCT ACCGCCGGGG GGACATGCTT
GAGCGGCGGC GCCGGATGAT GGAAGACTGG GCCCGCTATT GCAGCGGGCA AACGGGTGTA
GTGGTACCGC TCAAGCGAGA GGCTTCAGCA GCGTGA
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| Protein sequence | MASSRQLHRL NALRVAKEVA PGYHADGGGL YLQISTSGSR SWIFRYSLAK RAREMGLGPL
SAISLAEARA QAAHSRKLLA TGIDPIESRK ERERAAQATP DGLLFRDAAR DYINAHRDSW
RNAKHAQQWE NTLETYAYPV IGDVDVRDID TGMVVRVLQP IWMKKAETAS RVRGRIECVL
DAAKVLGKRS GENPALWRGH LDKLLPKRDR AKKVKHHPAL PWADIPGFMP ELAERAAPAA
RVLHLLILTC VRTTEALEAK PEEFDLDRRI WIVPPDRMKM EKELRVPLSE PAVQIVKEAL
KTADGYLFPG QKKGKPLSNM AMLNMLDRMG YEGITVHGFR STFRDWVAEC TEYPDSLAEM
ALAHAVESKV EGAYRRGDML ERRRRMMEDW ARYCSGQTGV VVPLKREASA A
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