Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1849 |
Symbol | |
ID | 1220687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2032082 |
End bp | 2032555 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637238241 |
Product | putative transcription regulator protein |
Protein accession | NP_519970 |
Protein GI | 17546568 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0705598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0434545 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCTC AGGAAAGAAC ACCCGCCGGC GCAGCCTTGG GCACCTCGGC GCTGTACTTG TTCAAGGTGG CCAGCGGCAT GCTCACCGAG GGCGACCGGC TGGTCGCAGA CCTGGGCCTG AGCAGTTCAC GCTGGCAGGT GCTCGGCACC ATCGTGGCAG CAGAAAGACC GCAGCCCGTG GCTTGGCTGG CCAGAGACAT GGGCGCGAAC CGTCAGAATG TTCAGCGCAT CGTCCACGAC CTGGCCCGGG ACGGGTTCGT GGAATTCGCC AACAACCCCC ATCACCGGCG GGCTCCGCTG GTTATGCTGA CTGCCAGCGG TCAAAACGTT CACAACCGGG CCGTGAACCT GGGGGCGCCA TGGATGAACG AGCTGGCCCG CGGAATTCCC CCCGAGGACA TCGAGATCAT GCGCCGGGTG TTGATGGCCC TTCAAACCAA ACTGGAAAAG GGCGTTCCTG CACAGCAAGC CTAG
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Protein sequence | MKAQERTPAG AALGTSALYL FKVASGMLTE GDRLVADLGL SSSRWQVLGT IVAAERPQPV AWLARDMGAN RQNVQRIVHD LARDGFVEFA NNPHHRRAPL VMLTASGQNV HNRAVNLGAP WMNELARGIP PEDIEIMRRV LMALQTKLEK GVPAQQA
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