Gene RSc1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1836 
Symbol 
ID1220674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2007986 
End bp2008537 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content70% 
IMG OID637238228 
Producthypothetical protein 
Protein accessionNP_519957 
Protein GI17546555 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0567658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.110727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAAT GCCTCGCCCC CGATCCCACC GCCATGAGCG CCAACCACCA CCACACCTGG 
GGCAACGTCG ACCTCGAGCC CAAGGCGCTG CGCAATCTGT TCGGCAGCTA CCCCACCGGG
GTCGCGATCG TCACCACGCG CACGCCCGAC GGGCGTGCCG TGGGGCTGAC CATCAACTCC
TTCGCCACGC TGTCGCTGGC CCCGCCGCTC GTGCTGTGGA GCCTGGTCGA TCGCTCGCCC
AACCTGGACG CGTTCCGCGC GTGCTCGCAC TTCGCCATCA ACATCCTGGC GAACGGACAT
GAGGCGCTGG CCAAGCGCTT CGCCAGCGCC GCCGTGCCCG ACAAGTTCGA CGGCGTGGCG
CTGCAGGAAA CGCCGGAAGG CGTGCCCGCG ATCGACGGCG CGGTCACGAC CCTGGTCTGC
GCCCACGACC ACTGCCGGCA CGTCGGCGAT CACCTGCTGC TGGTCGGGCG CGTGGTGCGC
ACCGCCAATC AGCCGGGTAC GCCGCTGGTC TTCCATGCCG GCCGCTTCAC GTCGCTGCAT
GCGGCCTCGT AG
 
Protein sequence
MLQCLAPDPT AMSANHHHTW GNVDLEPKAL RNLFGSYPTG VAIVTTRTPD GRAVGLTINS 
FATLSLAPPL VLWSLVDRSP NLDAFRACSH FAINILANGH EALAKRFASA AVPDKFDGVA
LQETPEGVPA IDGAVTTLVC AHDHCRHVGD HLLLVGRVVR TANQPGTPLV FHAGRFTSLH
AAS