Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1836 |
Symbol | |
ID | 1220674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2007986 |
End bp | 2008537 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637238228 |
Product | hypothetical protein |
Protein accession | NP_519957 |
Protein GI | 17546555 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0567658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.110727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCAAT GCCTCGCCCC CGATCCCACC GCCATGAGCG CCAACCACCA CCACACCTGG GGCAACGTCG ACCTCGAGCC CAAGGCGCTG CGCAATCTGT TCGGCAGCTA CCCCACCGGG GTCGCGATCG TCACCACGCG CACGCCCGAC GGGCGTGCCG TGGGGCTGAC CATCAACTCC TTCGCCACGC TGTCGCTGGC CCCGCCGCTC GTGCTGTGGA GCCTGGTCGA TCGCTCGCCC AACCTGGACG CGTTCCGCGC GTGCTCGCAC TTCGCCATCA ACATCCTGGC GAACGGACAT GAGGCGCTGG CCAAGCGCTT CGCCAGCGCC GCCGTGCCCG ACAAGTTCGA CGGCGTGGCG CTGCAGGAAA CGCCGGAAGG CGTGCCCGCG ATCGACGGCG CGGTCACGAC CCTGGTCTGC GCCCACGACC ACTGCCGGCA CGTCGGCGAT CACCTGCTGC TGGTCGGGCG CGTGGTGCGC ACCGCCAATC AGCCGGGTAC GCCGCTGGTC TTCCATGCCG GCCGCTTCAC GTCGCTGCAT GCGGCCTCGT AG
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Protein sequence | MLQCLAPDPT AMSANHHHTW GNVDLEPKAL RNLFGSYPTG VAIVTTRTPD GRAVGLTINS FATLSLAPPL VLWSLVDRSP NLDAFRACSH FAINILANGH EALAKRFASA AVPDKFDGVA LQETPEGVPA IDGAVTTLVC AHDHCRHVGD HLLLVGRVVR TANQPGTPLV FHAGRFTSLH AAS
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