Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1795 |
Symbol | |
ID | 1220633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1930172 |
End bp | 1931020 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637238187 |
Product | hypothetical protein |
Protein accession | NP_519916 |
Protein GI | 17546514 |
COG category | [R] General function prediction only |
COG ID | [COG1409] Predicted phosphohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.239859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0189178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTTCC TGCAACTGAC CGACCTCCAC ATCAAGCCGC CCGGCCGCCT GGCCTACCGG CGCGTCGATA CGGCCGCCTA CCTGTCACGC TGCGTCGCGC ACATCCTGGC GCAGCCCGCG CGCCCCGATG CCATCGTGCT GACCGGTGAC CTGGTCGACG CCGGCGCGCC GGACGAATAC GCGCACCTGC GCGCGCTGCT GGCGCCGCTC GACGCCGCCG GCATCCGCAT GCTGCCGGTG CTCGGCAACC ACGATGCCCG CGCGGCCGCG CACGAGGCCT TCGCCGATTG GCTCGCCCCC ATCCCGGCCG AGGCGCGGGA CCCACAGGCC TTCCAGTACT GGACCGACAT CGGCGAGGTG CGCCTGATCG TGCTGGACAC GCTGGATACC GGCGCCCCCG GCGGCCGGCT CGGCGTGCCG CGGCTGGACT GGCTGCACGA TGCGCTGGCG GCCGAGCCCG CGCGGCCGGT GGTGATTGCC ATGCATCACC CGCCGTTCGC CACCGGCATC GGCCACATGG ACGTGCAGTC GCTGGCCGCT GAGGACATCC CCGCCTTCGC GCAGATCGTG CGCGCCGCCG GCAACGTCGA GCGCATCCTG TGCGGGCACC TGCACCGCGC CATCGACGTG CGCTTCGCGG GCACGGTGGC GTCGACCTGC CCGTCGCCGG CGCACCAGGT GGCGCTGGAT CTCGATCCGG AGGGCGCGCC GGGCTTCGTC ATGGAGCCGC CCGCCTACCG GGTGCACGCC TGGGTGCCGG GGCTGGGCCT GGTGAGCCAT CTGGCCTACG TGGGCACGTT CGACGGCCCG CACCCGTTCT TCGAGCCGGA TGGGCGCCTG ATCGATTGA
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Protein sequence | MHFLQLTDLH IKPPGRLAYR RVDTAAYLSR CVAHILAQPA RPDAIVLTGD LVDAGAPDEY AHLRALLAPL DAAGIRMLPV LGNHDARAAA HEAFADWLAP IPAEARDPQA FQYWTDIGEV RLIVLDTLDT GAPGGRLGVP RLDWLHDALA AEPARPVVIA MHHPPFATGI GHMDVQSLAA EDIPAFAQIV RAAGNVERIL CGHLHRAIDV RFAGTVASTC PSPAHQVALD LDPEGAPGFV MEPPAYRVHA WVPGLGLVSH LAYVGTFDGP HPFFEPDGRL ID
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