| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1793 |
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| Symbol | |
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| ID | 1220631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1928299 |
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| End bp | 1929096 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238185 |
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| Product | ABC transporter permease |
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| Protein accession | NP_519914 |
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| Protein GI | 17546512 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.849444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0352963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCC TGCTGCCGAT GGCGCAGTGG CTGGTGACGC TGCTGCTGTG CCTGTTCCTG
ATCGTGCCGG TGGCGCTGTC GATGGCCGTG GGGCTGACGC GCAACTACAT CCGCGGCTTC
AAGAGCGGCT GGACCTTCGA CTGGGTCGCC CAGGTGTGGG AGACCTATCA CGCGTCGATC
TGGATGTCGC TGCTGGTGGC GCTGTGCACG CTGGCGATCG TGCTGGCGGC GGGCGTGCCG
GCCGGCTATG TGCTGGCGCG CCGCCAGAGC CGCGCCAGCC GCCTGGTCGA GGAGTGCCTG
ACCTTGCCCG TGGCGCTGCC GGGCCTGGCG ACTGCGCTCG GCCTGATCAT CGCGTACGGC
GGCGTGGGTG CGTTCCGCGA GAGCGTGTGG TTCATCGTCT GCGGGCACGT GGTGTTCACG
CTGCCGTTCA TGGTGCGCGC GGTGGCGGCG GTCTGCGCCG CGCAGGACCT GAAGACGCTG
GAGGAGGGCG CGGCCAGCCT GGGCGCGACG TTCTGGCAGC GCTTTCGCAC CATCGTGCTG
CCCAATGCGC GGCCCGGCAT CCTGGCCGGG GCGCTGACGG TGGTGACGCT GTCGGTGGGC
GAGTTCAACC TGACCTGGAT GCTGCACACC CCGCAGACCA AGACCCTGCC GGTGGGCCTG
GCCGATACCT ATGCGTCGAT GCGGCTGGAG ATCGCCAGCG CCTACACGCT GATCTTCTTC
GTCATGATCG TGCCGCTGCT GGTGCTGATG CAGCGCTTCG GTGGCCTGCG CACGACCAAC
GGAAACCCTT CCCGATGA
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| Protein sequence | MKRLLPMAQW LVTLLLCLFL IVPVALSMAV GLTRNYIRGF KSGWTFDWVA QVWETYHASI
WMSLLVALCT LAIVLAAGVP AGYVLARRQS RASRLVEECL TLPVALPGLA TALGLIIAYG
GVGAFRESVW FIVCGHVVFT LPFMVRAVAA VCAAQDLKTL EEGAASLGAT FWQRFRTIVL
PNARPGILAG ALTVVTLSVG EFNLTWMLHT PQTKTLPVGL ADTYASMRLE IASAYTLIFF
VMIVPLLVLM QRFGGLRTTN GNPSR
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