| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1774 |
|---|
| Symbol | |
|---|
| ID | 1220612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1900748 |
|---|
| End bp | 1901194 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637238166 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_519895 |
|---|
| Protein GI | 17546493 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2153] Predicted acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCTC CCGAATCCGC CCACCCGCCC GCCACGGTAC AAGTCGACCG CTGGGACGCC
TTGCGCGACG AGGCCGGCGC CGTCCGCTAC GACGTGTTCG TCATCGAGCA GAACGTGCCC
GTCGAACTGG AATGGGACGA CGACGACGCC CGATCCTGGC ACGCCGTGGC GCGTGACGCC
TCGGGCCGCG CCGTGGCCAC CGGCCGGCTG CTGCCCGACG GCCACATCGG CCGCATGGCG
GTGCGCAAGG AGGCGCGTGG CACCGGCATC GGCGCGCGCG TGCTGCAGGC GCTGATCGAC
AAGGCCCGGG CACTGGGCTA CACGCAGCTG ATCCTCAACG CACAGACCCA CGCCATGCCG
TTCTATGCGC GCGCCGGCTT CACGCCCGAG GGGGACGAGT TCGAGGAGGC CGGCATTGCG
CACCGGACCA TGCGCCGCGT GCTGTGA
|
|---|
| Protein sequence | MTPPESAHPP ATVQVDRWDA LRDEAGAVRY DVFVIEQNVP VELEWDDDDA RSWHAVARDA
SGRAVATGRL LPDGHIGRMA VRKEARGTGI GARVLQALID KARALGYTQL ILNAQTHAMP
FYARAGFTPE GDEFEEAGIA HRTMRRVL
|
|---|
| |