| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1751 |
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| Symbol | livH1 |
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| ID | 1220589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1874065 |
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| End bp | 1875012 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238143 |
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| Product | putative amino acid transmembrane protein |
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| Protein accession | NP_519872 |
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| Protein GI | 17546470 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.207162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.717101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAATTCC TAGTCATCAA CCTGTTGAAC GGCATCAGCT ACGGGCTGCT GCTGTTCATG
CTGTCGTCGG GCCTGACGCT GATCTTCAGC ATGATGGGCG TCCTCAACTT CGCGCATGCC
AGCTTCTACA TGCTGGGCGC GTACTTCGCC TACGTCGTCA GCGGATACCT GGGCTTCTGG
GCCGCGCTGA TCGTGGCGCC GCTGCTGGTG GGCGCGCTGG GGGCGCTGGT CGAGCGCTTC
GGCCTGCGCA CGGTGCACCG CTACGGCCAT GTCGCCGAGC TGCTGTTCAC CTTCGGCCTG
GCCTACCTGA TCGAAGAGGG CGTGAAGCTG GTGTGGGGCC TGCCGGCCGT GCCGTACCGC
GTGCCCGAGG CGCTGGACGG GCCGCTGTTC ACGCTGTTCA CCTCGTCCTT CCCGAAGTAC
CGCGCCTTCA TGATGCTGGT GTCGCTGCTG ATGCTGGTGG GCATCTTCCT GCTGCTCACG
CGCACGCGCA TCGGGCTGGT CATCCAGGCG GCGCTGACGC ATCCGGACAT GGTCGAGGCG
CTCGGTCACA ACGTGCCGCG CGTCTTCATG CTGGTGTTCG GCGGGGGCTG CGCGCTGGCC
GGGCTGGCCG GAGTGATCGG CGGCAACGCG TTCGTGACCG AGCCGTCGAT GGCGGCGGCG
GTCGGGTCGA TCGTCTTCGT GGTGGCGGTG GTGGGCGGCA TGGGCTCGCT GGTGGGCGCC
TTCATCGCCT CGCTGCTGAT CGGTTGCATC CAGACCTTTG CCGTCACGCT CGATGTGTCG
GTGACGAGCC TGCTGGGCAA GCTCGGTGTC GCGCTCAACC CGGACGTGCC GCTGATCTCC
GTGTGGAACC TGACCATCGC GCAGGTGGCG CCGGTGCTGC CGTACCTGCT GCTGGTGCTG
ATGCTGATCT TCCGCCCGCG CGGGCTGATG GGCACGCGGG AGGGATAA
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| Protein sequence | MEFLVINLLN GISYGLLLFM LSSGLTLIFS MMGVLNFAHA SFYMLGAYFA YVVSGYLGFW
AALIVAPLLV GALGALVERF GLRTVHRYGH VAELLFTFGL AYLIEEGVKL VWGLPAVPYR
VPEALDGPLF TLFTSSFPKY RAFMMLVSLL MLVGIFLLLT RTRIGLVIQA ALTHPDMVEA
LGHNVPRVFM LVFGGGCALA GLAGVIGGNA FVTEPSMAAA VGSIVFVVAV VGGMGSLVGA
FIASLLIGCI QTFAVTLDVS VTSLLGKLGV ALNPDVPLIS VWNLTIAQVA PVLPYLLLVL
MLIFRPRGLM GTREG
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