| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1729 |
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| Symbol | |
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| ID | 1220567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1850171 |
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| End bp | 1851091 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637238121 |
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| Product | transcription regulator protein |
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| Protein accession | NP_519850 |
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| Protein GI | 17546448 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.693233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACC CGCTGGAAAC GATGCAGATC TTCATCCGCG TGGCCGAGCT CGCCAGCTTC
ACGCGCGCGG CCGAAAGCCT GGGAATTCCC AAGCCGGCCG CCTCCGTGGC GGTGCAGCAG
CTGGAGACGC TGCTCGGCAC GCGCCTGCTG CATCGGACCA CGCGCAAGGT CCAGCTCACG
CAGGACGGCC AGGCCTTCTT CGAGCGCAGC CAGGACCTGC TGGCCGACAT GGAAGAGCTG
CAGACGATGT TCCGCCAGAG CCCGCAGGCG CTGCGCGGCC GGCTGCGCGT CGACATGCCG
GCGGGCGTCG CGCGCAAAGT CGTCATCCCC GCCCTGCCCG CCTTCCTGGA TGCCCATCCG
CAGCTCGAGA TCGAGCTCTC CAGCACCGAC CGCCGCGTCG ACCTGGTCCG CGAAGGCTTC
GACTGCGTGC TGCGCATCGG CACGCTCGGC GACAGCAGCC TGATCGCCCG CCCGCTCGGC
CAGCTGCCGC AGATGAACTG CGCCAGCCCC GCCTACATCG CGCGCTACGG CATGCCGCGC
TCGCTGGACG ACCTCGACCA TCACCGCCTC GTCCACTACG TGCAGACCCT GGGCACCAAG
GCGCCGGGCT GGGAATACCG CATCGACGGA CGGACGGCCC ATCGCCCCAT GCCGGGGGTG
GTGACGGTCA GCACGGCCGA GAGCTACGAA GCCGCCTGCC AGGCCGGGCT GGGGATCATC
CAGGCGCCGG TGTCCGTGCT CGCGCCACAG GTCGCGCGCG GCGAGCTGGT GGAGGTGCTG
CCGCAGTACC GGCCGGCGCC GATGCCGGTG TCGCTGGTGT ATCCGAACCG GCGCAACCTG
CCGGTGCGGG TGCAGGTGTT CATGCACTGG GTCGCCGAAC AGCTCGCGCC GCACCTGGCG
CCGATCACGC CGGACGCTTA G
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| Protein sequence | MSNPLETMQI FIRVAELASF TRAAESLGIP KPAASVAVQQ LETLLGTRLL HRTTRKVQLT
QDGQAFFERS QDLLADMEEL QTMFRQSPQA LRGRLRVDMP AGVARKVVIP ALPAFLDAHP
QLEIELSSTD RRVDLVREGF DCVLRIGTLG DSSLIARPLG QLPQMNCASP AYIARYGMPR
SLDDLDHHRL VHYVQTLGTK APGWEYRIDG RTAHRPMPGV VTVSTAESYE AACQAGLGII
QAPVSVLAPQ VARGELVEVL PQYRPAPMPV SLVYPNRRNL PVRVQVFMHW VAEQLAPHLA
PITPDA
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