| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1652 |
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| Symbol | crtB |
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| ID | 1220487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1776203 |
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| End bp | 1777075 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637238041 |
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| Product | putative phytoene synthase protein |
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| Protein accession | NP_519773 |
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| Protein GI | 17546371 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.665297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCC TGTCCGTCCC GCCCTGCATT CCGTTTTCCG TGACTCCCGA CGACTACTGC
GCCGACAAGG CCGCCCCCGC CGGCAGCGAT CTGTATTACA GCGTGCTGTT CCTGGCGCCC
GAACGCCGCC GCGCGACCGT CGCCCTCGAA GCGGTGCGCC GCGAGCTGGA AGACGCGGTG
CGCGATGCCA GCGACCCGGC GGTGGTGCAA TCCAAGCTGC AATGGTGGCG GCAGGAACTG
GCGCGGCTGT TCGACGGGCG GCCCGAGCAT CCGGCCACCA AGGCACTGCA GCCGCACCTG
GCCGCCTACG ACATCGGCGC CGTGCACCTG GGCGAGCTGT TCGCCGGCGT CGAAGCCGAT
GCCATGCAGA ATCGCTACCT GGACTGGCCC AACCTGCGCC GCCACGGCGA CCAGGTCGCC
GGCGTGGCGG GCCGGCTGGC CGCGCGCATC GCCGGCCATG CGCAGGGGCG CACGCTGGAA
TTCGCACGCC TGCTGGCACT GGCCGAGCAA CTGGTGCATT TCATCCGCAA CCTGGGCGAC
GACGTGCGCA ACAACCGCGT CTACATCCCC GTGGACGAAC TGCAGCGCTT CAATGTCCCG
GCGGCCGACC TGTTCAACCG CCGCTACTCG GACGGATTCA AGGCGCTGAT GGGATTCCAG
GCCGAGCGCG CCCGCGCCAC GCACCGGGAA GCGCTGGCCG CGCTCCCCGC GGAAGACCGC
CGCGCCCAGC GGCCGGCGCT GATCCGCGGC GTGCTGGCGA TGCGGCTCCT GGACGAACTC
GAGGCCGACG GCTTCCAGGT GCTGACCCAG CGCACCGACC TGACGCCGCT ACGCAAGCTG
TGGCTGGCCT GGAAGACCCA GCTCCGCGCC TGA
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| Protein sequence | MAALSVPPCI PFSVTPDDYC ADKAAPAGSD LYYSVLFLAP ERRRATVALE AVRRELEDAV
RDASDPAVVQ SKLQWWRQEL ARLFDGRPEH PATKALQPHL AAYDIGAVHL GELFAGVEAD
AMQNRYLDWP NLRRHGDQVA GVAGRLAARI AGHAQGRTLE FARLLALAEQ LVHFIRNLGD
DVRNNRVYIP VDELQRFNVP AADLFNRRYS DGFKALMGFQ AERARATHRE ALAALPAEDR
RAQRPALIRG VLAMRLLDEL EADGFQVLTQ RTDLTPLRKL WLAWKTQLRA
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