Gene RSc1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1501 
Symbolmel 
ID1220330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1606005 
End bp1607243 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content69% 
IMG OID637237884 
Producttyrosinase oxidoreductase protein 
Protein accessionNP_519622 
Protein GI17546220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.951437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.940598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCG ACTTCACGAT CAACAACGGT GGTGACGCAG CCGCGCGCTA CCTCACCTGG 
GCGCCGTCGC CATTGCGGCT TCGCCTGCTC GATGCCACGC CGGGGCCGGA TGTGGTCGCA
ACCCTGTCGG AAGATCGCCA GCCCAATGGC GGCTCCATCC GGTTCTGTGC GACGCCCGAT
GGCAACTTCA CCCCGACGCT CAAAGTGCCG CTGCCGGCGA GCGGCGCCTC CGTGACGGTC
TACGTTCGCG GAAAATTCGG CACGCCCAGC CAGGCCGATG GCGACGTCAG TATCGTGGTC
GGCGGGCCGG CGTCGGAACT CGGCCGCTTG CCCGTCATGG TGCGGGTGCG CAAGAACGCG
AATCAGCTGA CCCCGGCCGA GCGGGACCGC TTCATCTCGG CCATGGCGCA GATCAACAAC
CGGGGGACGG GGCGGTTCAC CGATTTCCGC AACATGCACG TCGCGGGCCG TGCCGATCAG
CAGGCCCATG GCGGCCCCGG CTTCCTGCCG TGGCACCGGG CCTATCTGCT CGACCTGGAG
CGCGAGCTGC AGGCCATCGA CCCCGCGGTG ACGATCCCGT ATTGGCGCTT CGATCGGCCG
GCGCCGAATC TGTTCACCAC CGACTTCATC GGCGTGCCGG ATGCGCTCGG CACGGTGAGT
TTCAGCCCGG CCAACCCGCT GCAGTTCTGG GCCACCGACG GCGTGCAAGG GATCCTGAGG
CGCCAGCTGG GCGCGAGCCC CGGCGCGCAG GCCGCCCCGA ACATCCTGAC CGAGGCGCAG
ACGCTGGCGC TCGGCAGTGC GTACCGGAAT TTCCGGGGCA TGCAGGGCAA TCCGCACGGC
TCCGCGCATG TCAGCTATTT CTCGGGCAGC ATCTCGTCGA TCCCGACCGC CGCCAAGGAT
CCGCTGTTCT TCCTGCTGCA CTGCAATGTC GACAGGCTGT GGGCCAAATG GCAGTCGCAG
GTGGGGCGGT ACGATGCGAA CGTGGCGGCC GCCTATGACG CCGGTCCGAC GCCGACGAGC
CTGCTCGCGG GCCACAATCT GCACGACACG CTGTGGCCGT GGAACGGCAT CGTGACGCCG
CCTCGGCCGT CGACCGCCCC CGGCGGAGCC ATGGCCGGAT CGTCGTGCGT CTCGGCGCCG
GGGAACGCGC CCCGCGTCAG CGACATGCTG GACTTCCAGG GGGTGGTGAG CAGTTCGGCC
AAGCTCGGCT TTGCCTACGA CGATGTGCCC TTGCCCTGA
 
Protein sequence
MRIDFTINNG GDAAARYLTW APSPLRLRLL DATPGPDVVA TLSEDRQPNG GSIRFCATPD 
GNFTPTLKVP LPASGASVTV YVRGKFGTPS QADGDVSIVV GGPASELGRL PVMVRVRKNA
NQLTPAERDR FISAMAQINN RGTGRFTDFR NMHVAGRADQ QAHGGPGFLP WHRAYLLDLE
RELQAIDPAV TIPYWRFDRP APNLFTTDFI GVPDALGTVS FSPANPLQFW ATDGVQGILR
RQLGASPGAQ AAPNILTEAQ TLALGSAYRN FRGMQGNPHG SAHVSYFSGS ISSIPTAAKD
PLFFLLHCNV DRLWAKWQSQ VGRYDANVAA AYDAGPTPTS LLAGHNLHDT LWPWNGIVTP
PRPSTAPGGA MAGSSCVSAP GNAPRVSDML DFQGVVSSSA KLGFAYDDVP LP