Gene RSc1494 details

Gene Information

• Locus tag: RSc1494
• ID: 1220323
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 1598285
• End bp: 1598986
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637237877
• Product: putative integrase-like protein
• Protein accession: NP_519615
• Protein GI: 17546213

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.145939
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.519223
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGAAGTACC GCTTCGCCGG CAAGGAAAAG CGGTTGTCCC TTGGGGTGTA TCCCGAAGTC 
GGCCTGAAGG AAGCACGAGA CAGGCGTGAG GATGCAAAGC GGCTGCTGGC TGATGGCGTT 
GATCCCTCGG TTGAACGCAG GGTCCAGAAG GTGGCCACGG TTGAGCGGGC GGCAAGCAGC 
TTCGAGGCGG TAGCCCGCGA GTGGCACGCC AAGTACGCGC CGAGCTGGTC CGAGAGCAAT 
GCCAAGAAGG TGCTGGCCCG CTTGGGGAAC GACGTGTTCC CGGTATTGTT GTTCCCGACC 
AGAACGAAGA CCGGCCGCGA TAATAGCTTT GCTGTCATCC GTATGCGGCG CAGCGAGTTC 
TTGGCGCTTC GTTGGCAGGA CGTCGAATTA CAGGACCGCT TTGTAAGACT CCACGACACG 
AAAAATGGTG ATGCCCGCGA CGTGCCGCTG TCCACCCGAG CAGCGTCCAT GCTGGCCGGG 
CTTCCTCGAC ACATTTCGGG CCAAGTGTTC CCCGTCAGTG CGGACGCCGT GAAAAAGTCG 
TATAGCACGC GCTGCGGTCC GAATCAGCGT TGTGCGGTCG TATGCGCCAT CGGCAAACAG 
GTGTTTCACA CCCGGCCAGC TTCGCCTCGC GTTCTCGATG TTCTTTTTTT CGACATCCCG 
CCTTTACATC ACCCTTGCAG GGAATTTTCA AACGGGCGCT AA 

 

Protein sequence

MKYRFAGKEK RLSLGVYPEV GLKEARDRRE DAKRLLADGV DPSVERRVQK VATVERAASS 
FEAVAREWHA KYAPSWSESN AKKVLARLGN DVFPVLLFPT RTKTGRDNSF AVIRMRRSEF 
LALRWQDVEL QDRFVRLHDT KNGDARDVPL STRAASMLAG LPRHISGQVF PVSADAVKKS 
YSTRCGPNQR CAVVCAIGKQ VFHTRPASPR VLDVLFFDIP PLHHPCREFS NGR