Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1240 |
Symbol | iolC |
ID | 1220063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1313587 |
End bp | 1315539 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637237617 |
Product | transferase kinase protein |
Protein accession | NP_519361 |
Protein GI | 17545959 |
COG category | [S] Function unknown |
COG ID | [COG3892] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCGT TGAACTTTCC GAGTGACCGC CCCATCGATC TGGCCTGCCT GGGCCGGGTT GCCGTGGACC TGTATGCGCA GCAGATCGGC AGCCGCCTGG AAGACGCGCG CAGCTTCCAG ATGTATCTGG GCGGCTCGTC CGGCAACGTG GCGTTCGGCG TGGCGCGGCT GGGCCTGAAA ACCGCGATGA TCTCGCGCGT CGGCGACGAG CAGATGGGCC GCTTCCTGCG TGAAACCCTG GAACGCGAGG GCTGCGACAC CAGCCAGCTC CAGACCGATC CGGAGCGCCT CACCGCGCTG GTGCTGCTCG GGCTGAAAGA CCGCGACACC TTCCCGCTGC TGTTCGTGCG AGAGAACTGT GCCGACATGG CCGTGCGCGC CGACGGCATC GACGAGGGCT TCATCGCCGG CTGCCGCGCG CTGGCGATCA CGGGCACCCA CCTGTCGACG CCCACCACGC GCGAGGCCTC GCTGACAGCG CTCGCCTACG CCCGCCGCCA CGGCGCCGTG CGCATCCTGG ATATCGACTA CCGGCCGGTG CTGTGGGGCC TGACCAGCCG CGGCGCCGGC GAACACCGCT ACGTGCCCGA TGCGCACGTG ACGCGGCAAT TGCAGCAGGC GCTCGGCGAG TTCGACCTCC TGGTCGGCAC CGAAGAGGAA TTCCTGATCG CCGGCGGCGT GCCGCGCGAT CTGATGGCCT CGCTGCGCGC GGTCCGCCAG ATCTCGGGCG CGGTGCTGGT CGTCAAGCGC GGCGCGCTCG GCTGCTGCGT GATCGAAGGC GCGGTTCCCG AGCGCATCGA AGACGCGCCC ACTTTCCCCG GCGAGCGCGT CGAAGTGCTC AACGTGCTCG GCGCCGGCGA CGCGTTCCTG TCGGGGTTGC TCTCGGGACT GCTGCGCGGC AAGGGCTGGG CGGAATCCGC CCGCATCGCC AATGCGTGCG GCGCGATCGT CGTGTCGCGC CACGCGTGTT CGGCCGCCAT GCCGACGCCC GCGGAACTCG CGCACTGGTT CGGCGGCAGC CGCCATCCCG GCGTCGACGC CGATCGCGAG CTCGCCCACC TGCATCGCGT GACGGTGGCC CGTCCCCATT GGGACGACCT GTGCGTGATG GCCTTCGACC ACCGCAGCCA GTTCTACGAT CTGGCCGTCC AGGCCGGCGC CGGCGAATCC CGCATCAAGA CGCTCAAGCA ACTGCTGGTG CGCGCCGCCG AGCAGGTCGA GCGCGAGCGC GCCCTTCACG GCCACGTCGG CGTGCTGATC GACGGCGGCG CTTACGGCAG CGACGCACTC GCCTCGGCAA CCGGGCGCGG CTGGTGGGTC GGGCGCCCCG TGGAACTGCC GGGCTCCCGT CCGCTGCGCT TCGATGACAC ACGCTCGGTC GGCTCCGCGC TCATTCACTG GCCGACGGAA CAGGTCGTCA AGTGCCTCGT GCACTACCAC CCGGACGATC CGGCAACGCT GCGCGTGGAC CAGGAGCAGA AAGTGCTCGA ACTCTGGGAA GCCACCCGCG AGAGCGGCAA CGAACTGCTG CTGGAGATCA TTCCGCCGCG CCCGTTCACG CTGGCCGGCA CCGAAGACGA TGCCGTGCTG CGCACGGTCG CGCGCGTCTA CAACCTGGGC GTCCGCCCCG AATGGTGGAA GCTCGCGCCC ATGAGCGCCG ACGGCTGGAC GCAGCTCGAG GCGCTCATCA CCGAACGCGA CGCGCACTGC CGAGGCGCGG TGATCCTCGG GCTGAACCAG CCGCTGCAAT ATCTGGTCGA CAGCTTCCGC TCGGCAACCA ACCCGATCGT CAAGGGCTTC ATGGTCGGGC GCACGCTGTG GGCAGACGCC TCGCTGAAAT GGCTGCGCGG CGACATCTCC GACCAGGCAT TCATCGACGA GGTGGCAGGC AACTTTGCCC AACTGGCCGA TGCGTGGCTG GGCCGCCGCG CCGACGCCCG CTCCGCCGCC TGA
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Protein sequence | MSPLNFPSDR PIDLACLGRV AVDLYAQQIG SRLEDARSFQ MYLGGSSGNV AFGVARLGLK TAMISRVGDE QMGRFLRETL EREGCDTSQL QTDPERLTAL VLLGLKDRDT FPLLFVRENC ADMAVRADGI DEGFIAGCRA LAITGTHLST PTTREASLTA LAYARRHGAV RILDIDYRPV LWGLTSRGAG EHRYVPDAHV TRQLQQALGE FDLLVGTEEE FLIAGGVPRD LMASLRAVRQ ISGAVLVVKR GALGCCVIEG AVPERIEDAP TFPGERVEVL NVLGAGDAFL SGLLSGLLRG KGWAESARIA NACGAIVVSR HACSAAMPTP AELAHWFGGS RHPGVDADRE LAHLHRVTVA RPHWDDLCVM AFDHRSQFYD LAVQAGAGES RIKTLKQLLV RAAEQVERER ALHGHVGVLI DGGAYGSDAL ASATGRGWWV GRPVELPGSR PLRFDDTRSV GSALIHWPTE QVVKCLVHYH PDDPATLRVD QEQKVLELWE ATRESGNELL LEIIPPRPFT LAGTEDDAVL RTVARVYNLG VRPEWWKLAP MSADGWTQLE ALITERDAHC RGAVILGLNQ PLQYLVDSFR SATNPIVKGF MVGRTLWADA SLKWLRGDIS DQAFIDEVAG NFAQLADAWL GRRADARSAA
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