| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1106 |
|---|
| Symbol | purU |
|---|
| ID | 1219918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 1163543 |
|---|
| End bp | 1164415 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637237472 |
|---|
| Product | formyltetrahydrofolate deformylase |
|---|
| Protein accession | NP_519227 |
|---|
| Protein GI | 17545825 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
|---|
| TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0738057 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCGC TGTCCCGTTC ACCATCATTC ATTCTGACGC TGTCGTGCCC GAGCGCCCCC
GGCCAGGTGG CCGCCGTCGT CGGCCTGCTT GAGCGCCACC ACTGCTACAT CGACGAGCTG
ACCGTTTTCG ATGACGACCT GAACCACCGC TTCTTTGTCC GCTGCGTATT TCATCCGACG
GATGCACACG CGCTGCCCGT CGACGTGCTG AGGCAGGAGT TCGCCCCGAT TGCGGAAGCC
TTTGACATGC AGTGGGCAAT CCACGACGCC CAGGCTCGCC CGAAGGTGCT CATCATGGTG
TCGAAGCTCG AGCATTGCCT CGCGGATCTG CTGTTCCGCT GGCGCATGGG CGAACTGAAG
ATGGACATCG TCGGCATCGC CTCGAACCAC CCTGACCTGG AACCGCTGGC GCGCCAGCAC
GACCTGCCGT TCCGCCACTT CCCGATCGCA CCGGAAACAA AGGCGCAGCA GGAAGCGCAG
TGGCTGGACC TGTTCGAATC AAGCGGCGCG GAGCTCGTGA TCCTCGCGCG CTACATGCAG
GTGCTTTCTG CGCAGACGAG CAAGAAGCTC GTCAATCGCG CCATCAACAT TCACCACTCC
TTCCTGCCCG GCTTCAAGGG TGCGAAGCCC TATCACCAGG CCCATGCGCG CGGCGTCAAG
CTGATCGGCG CGACCGCGCA CTTTGTCACC GACGATCTCG ACGAAGGCCC GATCATCGAG
CAGGTGGTCG AGCGGGTCGA TCATTCGTAC CGGCCTGAAC ACCTGCTGGC CGTCGGCCGC
GACGTCGAAT GCCTGACACT CGCGCGCGCG GTCAAGGCGT TCATTGAACG GCGGGTCTTC
CTGAACGCAG ACCGGACCGT CGTATTCCAG TGA
|
|---|
| Protein sequence | MDALSRSPSF ILTLSCPSAP GQVAAVVGLL ERHHCYIDEL TVFDDDLNHR FFVRCVFHPT
DAHALPVDVL RQEFAPIAEA FDMQWAIHDA QARPKVLIMV SKLEHCLADL LFRWRMGELK
MDIVGIASNH PDLEPLARQH DLPFRHFPIA PETKAQQEAQ WLDLFESSGA ELVILARYMQ
VLSAQTSKKL VNRAINIHHS FLPGFKGAKP YHQAHARGVK LIGATAHFVT DDLDEGPIIE
QVVERVDHSY RPEHLLAVGR DVECLTLARA VKAFIERRVF LNADRTVVFQ
|
|---|
| |