Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1085 |
Symbol | nagL |
ID | 1219897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1143569 |
End bp | 1144210 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637237451 |
Product | putative GST-related protein |
Protein accession | NP_519206 |
Protein GI | 17545804 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | [TIGR01262] maleylacetoacetate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0173017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTCT ACAGCTTCTT CAACAGCTCC ACGTCGTACC GCGTGCGCAT CGCGCTGGCG CTCAAGGGGC TGCCGTACGA CTACCTGCCG GTCAACATCC GCACCGGCGA GCATCGCGCG GCAGACTACG TCGCGCACGT CAACCCGTCG GCGGGCGTCC CCACGCTGGT CGACGGCGCG CTGCGGCTCG GCCAGTCGCT GGCGATCATC GACTACCTCG ACGCGCGCCA TCCGCAGCCG CGCCTCGTTC CCGCCGATCC GCTGCGGCGG GCCCGCGTGC TGGAGCTGGC CAGCGCCATC GCCTGCGACA TCCACCCGGT CAACAACCTG CGCGTGCTGC GCTACCTGCA GGACGAACTG AAGGTGACGC CGCAGCAGAA GGACGCCTGG TACCGCCACT GGATCGACGA GGGGCTGGCC AGCGTGGAGC GCCTGCTGGC CCGCCACGGG CACGGCCCCT GGTGCTTCGG CGACGCACCG ACGCTGGCGG ACGTGGCGCT CGTGCCGCAG GTCGCCAACG CGCTGCGCAT GGGTTGCCCG CTCGATCGGT TCGAGCGCGT GCTGGCCGTG CATGCGCACG CGGGCACGCA CCCCGCCTTC GCCGAGGCCG CGCCGGCGCG CCAGCCCGAC TACACGGCCT GA
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Protein sequence | MQLYSFFNSS TSYRVRIALA LKGLPYDYLP VNIRTGEHRA ADYVAHVNPS AGVPTLVDGA LRLGQSLAII DYLDARHPQP RLVPADPLRR ARVLELASAI ACDIHPVNNL RVLRYLQDEL KVTPQQKDAW YRHWIDEGLA SVERLLARHG HGPWCFGDAP TLADVALVPQ VANALRMGCP LDRFERVLAV HAHAGTHPAF AEAAPARQPD YTA
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