Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1016 |
Symbol | |
ID | 1219825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1069347 |
End bp | 1070918 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637237379 |
Product | ABC transporter ATP-binding protein |
Protein accession | NP_519137 |
Protein GI | 17545735 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.339278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCG TCCCTGCACC GCGCACACCG CTGCTGCGGG CGTCCGCCCT CAGCAAGCAC TACGCCGCGC CTGTGCTGCG CGATGTCGAT CTCGACGTCT ACGCGGGCGA GGTGCTGGCC TTGACCGGCG AGAACGGCGC GGGCAAGAGC ACCCTGTCCA AGATCCTGTG CGGACTGGAG ACGCCGGCCT CCGGGTCGAT GTCGCTGGCC GGGCGCCTGT TCGCGCCCGC CTCGCGCTGC GACGCCGAGA CCCTCGGCGT GCGCATGGTG CTGCAAGAGC TGAACATGGT GCCCACGCTG ACGGTGGCCG AGAACCTCTT CCTCGGCAAC CTGCCGCGCC GCCGGGGCTG GATCGACCGC CCCGCGCTGC AGCGCCAGGC GGAACAGGCG CTGGCGCGGA TCGGACTCGA CCTAGACCCC CGCCTGCCCG TGCACCGGCT CGGCATCGGG CACCGGCAGA TGATCGAGAT CGCCCGCGCG CTGGCCAGCG CCTGCCGGGT CCTGGTGCTC GACGAGCCGA CTGCCATGCT CAGCGCGCAC GAGAGCGCGA CCCTGTTCGC CCGCATCGAT GCGCTGCGCC GCGACGGCGT GGCCGTCGTC TACATCTCGC ACCGGCTCGA CGAGCTGGCG CGCATCGCCG ACCGCATCGT CGTGCTGCGC GACGGCCGGC TGATCACCGA TGCGCCCGCC GCCACGCTCA CGCAGGACGC GCTGATCCGG GCCATGGTCG GACGCGAGCT GGCCGCGGAC ACCGGCGCAG AGCGCCCGGC CCGCGCGCCG CGACCGCCCG ATACCGCGCC GACCCTGCGC GTGACCGGCC TGACCCGGGC ACCCGCGGTG CACGATGTGT CGTTTGCCGT GGCGCCGGGC GAGATCTTCG GCATTGCCGG GCTGGTCGGC GCCGGACGCA CCGAGCTGCT GCGGCTCATC TTCGGGGCGG ACCGTGCGGA CGCCGGCACC ATCGAGACCG GAACGCCGCT GGCGCCACGG CGCATCCGCG CGCCGGGCGA TGCGGTGCGC CATGGCATCG GCCTGCTCAC CGAAGACCGC AAGGACGAAG GCCTGCTGCT CGGCCTGCCG ATCGCCGCCA ACATCGCCCT GGGCAACATG ACCGGCGCAG CACGGCGCGG CTGGCTGCAG CCGGCGCGCG AGCGGGCGCA GGCGCGGCGC CACATCGAGG CGCTGCGCAT CCGCTGCGCG GGGCCGGAGC AGGCGGTCGG CGAGCTGTCC GGCGGCAACC AGCAGAAGGT GGCGATCGCC CGCTGGCTGG AGCGCGACGC CCCGGTGCTG CTGTTCGACG AGCCCACGCG CGGCGTCGAC GTGGGCGCCA AATTCGACAT CTACGCCCTG CTCGAAGGGC TGGCCGCGCA GGGCAAGGCC CTGGTGGTGG TCTCCAGCGA CCTGCGCGAG CTGATGCAGG TCTGCGACCG CATCGGCGTG ATGCGCGCGG GGCGGCTGAC GCAGATCTTC CGCCGCGACA GCTGGAGCCG GGATGCCCTG CTTGCCGCCG CCTTCGGCGA ATGTCCCCCG CCGTCCTCCA CGTCCGCCCC GGAGACCGCC GATGCGTTCT GA
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Protein sequence | MTTVPAPRTP LLRASALSKH YAAPVLRDVD LDVYAGEVLA LTGENGAGKS TLSKILCGLE TPASGSMSLA GRLFAPASRC DAETLGVRMV LQELNMVPTL TVAENLFLGN LPRRRGWIDR PALQRQAEQA LARIGLDLDP RLPVHRLGIG HRQMIEIARA LASACRVLVL DEPTAMLSAH ESATLFARID ALRRDGVAVV YISHRLDELA RIADRIVVLR DGRLITDAPA ATLTQDALIR AMVGRELAAD TGAERPARAP RPPDTAPTLR VTGLTRAPAV HDVSFAVAPG EIFGIAGLVG AGRTELLRLI FGADRADAGT IETGTPLAPR RIRAPGDAVR HGIGLLTEDR KDEGLLLGLP IAANIALGNM TGAARRGWLQ PARERAQARR HIEALRIRCA GPEQAVGELS GGNQQKVAIA RWLERDAPVL LFDEPTRGVD VGAKFDIYAL LEGLAAQGKA LVVVSSDLRE LMQVCDRIGV MRAGRLTQIF RRDSWSRDAL LAAAFGECPP PSSTSAPETA DAF
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