Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0760 |
Symbol | |
ID | 1219567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 803960 |
End bp | 804589 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637237121 |
Product | hypothetical protein |
Protein accession | NP_518881 |
Protein GI | 17545479 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | [TIGR03035] arylformamidase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.316703 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAACGTA CTTTGTGGGA CATCAGCCCC GCCCTCTCGA CCGCCACGCC CACCTGGCCC GGCGACACGC CGTTTTCGCA GGAAATTGCG TGGAAGCTGG AAGGCGACTG CCCGGTCAAC GTCGGGCGCA TCACGCTGTC GCCGCACACC GGTGCGCACG CCGACGCGCC GCTGCACTAC CACGCGGACG GCGCCCCGAT CGGCGCGGTG CCGCTGGACG CCTATCTCGG CCCATGCCGC GTCATCCACT GCGTGGGCGT GGCGCGCGTC GAGCCGGAGC ACGTGCGCGA TGCGCTGGAC GGCGCGCCGC CGCGCGTGCT GCTGCGCACC TATGCGCGCA TGCCCCAGAA CGCCTGGGAT GACCACTTCG CCGCCGTCGC GCCCGAGACC ATCGGACTGC TGGCCGCGCA CGGCGTGCGC CTGATCGGCA CCGACACCGC CTCGCTCGAT CCTCAGACCT CCAAGACCAT GGACGCGCAT CACGCCGTCG GCCGCCACGG CCTGGCCATC CTCGAGGGCC TGGTGCTCGA CGACGTGCCC GCCGGCGACT ACGAACTGAT CGCCCTGCCG CTCAAGTTCG CCACGCTCGA CGCCAGCCCG GTGCGCGCCG TACTGCGCCG CCTGCCCTGA
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Protein sequence | MERTLWDISP ALSTATPTWP GDTPFSQEIA WKLEGDCPVN VGRITLSPHT GAHADAPLHY HADGAPIGAV PLDAYLGPCR VIHCVGVARV EPEHVRDALD GAPPRVLLRT YARMPQNAWD DHFAAVAPET IGLLAAHGVR LIGTDTASLD PQTSKTMDAH HAVGRHGLAI LEGLVLDDVP AGDYELIALP LKFATLDASP VRAVLRRLP
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