Gene RSc0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0616 
Symbol 
ID1219421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp663206 
End bp663676 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content64% 
IMG OID637236975 
Producthypothetical protein 
Protein accessionNP_518737 
Protein GI17545335 
COG category[S] Function unknown 
COG ID[COG4922] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.481239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCC TTGCCTGCGC TCACGCGCAA GAAGCCGTGC TGCCCGCGCC GAACGCCGAG 
GCCCTGTTCA CCAGCTGCGA CCCCAAGCTT CATGCCAACA AACAGGTGGT CTACCAGATC
ATCCGGGAGT TGCTTGAAGC AGGGCATTGG GAGCGGGCTG ACCGGTATCT GACGCCGCGC
TACATCCAGC ACAACCCCAA CGCCCAGTCT GGCCGGGATG CCGTTGTCCG CTTCTTTACC
GAGGTGCTGA AAGTCAAGCC TCGCCCGGTT GCCCTGACGA TCAGCACACC CATCGTGGCG
GTGATGGCGG AGGGCGATCT GGTCACCGTG GTCTATCCGA GGACGGTCAG CACGCCGCAA
GGGTCTTACA CGACAACCTG GTTCGACACC TGGCGGATCG TGGACGGCAA GGCGGACGAG
CACTGGGACC CCGCGCTGAA AAACGAGACC CCGCAAATCG GGTCCCGCTA G
 
Protein sequence
MAGLACAHAQ EAVLPAPNAE ALFTSCDPKL HANKQVVYQI IRELLEAGHW ERADRYLTPR 
YIQHNPNAQS GRDAVVRFFT EVLKVKPRPV ALTISTPIVA VMAEGDLVTV VYPRTVSTPQ
GSYTTTWFDT WRIVDGKADE HWDPALKNET PQIGSR