Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0616 |
Symbol | |
ID | 1219421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 663206 |
End bp | 663676 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637236975 |
Product | hypothetical protein |
Protein accession | NP_518737 |
Protein GI | 17545335 |
COG category | [S] Function unknown |
COG ID | [COG4922] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.481239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGCC TTGCCTGCGC TCACGCGCAA GAAGCCGTGC TGCCCGCGCC GAACGCCGAG GCCCTGTTCA CCAGCTGCGA CCCCAAGCTT CATGCCAACA AACAGGTGGT CTACCAGATC ATCCGGGAGT TGCTTGAAGC AGGGCATTGG GAGCGGGCTG ACCGGTATCT GACGCCGCGC TACATCCAGC ACAACCCCAA CGCCCAGTCT GGCCGGGATG CCGTTGTCCG CTTCTTTACC GAGGTGCTGA AAGTCAAGCC TCGCCCGGTT GCCCTGACGA TCAGCACACC CATCGTGGCG GTGATGGCGG AGGGCGATCT GGTCACCGTG GTCTATCCGA GGACGGTCAG CACGCCGCAA GGGTCTTACA CGACAACCTG GTTCGACACC TGGCGGATCG TGGACGGCAA GGCGGACGAG CACTGGGACC CCGCGCTGAA AAACGAGACC CCGCAAATCG GGTCCCGCTA G
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Protein sequence | MAGLACAHAQ EAVLPAPNAE ALFTSCDPKL HANKQVVYQI IRELLEAGHW ERADRYLTPR YIQHNPNAQS GRDAVVRFFT EVLKVKPRPV ALTISTPIVA VMAEGDLVTV VYPRTVSTPQ GSYTTTWFDT WRIVDGKADE HWDPALKNET PQIGSR
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