| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0542 |
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| Symbol | |
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| ID | 1219346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 586608 |
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| End bp | 587525 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637236900 |
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| Product | transcription regulator protein |
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| Protein accession | NP_518663 |
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| Protein GI | 17545261 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0164617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.907406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCA ACCAACTGGC GCTGTTCGTG CGCGTCGTCG AAGCGGGGAG CTTCACGGCG
GCGGCGGTGC GGCTGGACTT GCCCAAGTCG TCGGTCAGCC GGGGCATCGC CGCGCTCGAA
CAGGATTTGA ACGTCCGGCT GCTACAGCGC ACCACGCGCA CGCTGCACCT GACCGATGCC
GGCCAGAGCC TGTACCAGGT GGCGTCGCAT GCACTGGAAG AGATCGAGCG CGCCACCACC
TGCGCCGGTG AACTGCAGGA CCTGCCGCGC GGCAAGGTGC GCATGACGGC CCCCGAAGAC
GTCGGCCGGC TGCTGATCGC GCCGATCGTG GCGCGCTTCA TGCAGCAGTA CCCCGACATC
GACCTCGACG TGGTGCTGAC GCCGCGCAAC GTCGATCTCG TGCAGGAGGG CTTCGATCTG
GCGGTCCGCG TCGGGCGCCT GGCCGACAGT TCGCTGGTGG CCCGGCCGTT GGGCGTGCTG
CGCATCGGCC TGTTCGCCTC GCCGGACTAC CTGCAGAAGC AGGGCGTGCC GCAGGCGGTG
CGCGACCTGA GTCATCACAA CTGCCTCGAT TTCCGCGGCA CCGGCCGCGG CGAGACGCAA
TGGCGCCTGG TCGGCCCCGA CGGCCTGAAG ACCGTGGCCG TGCGCGCGCG CCTGAATGCC
GACAGCCTGT CCTATCTCGA AACGCTGATC GCGAGCGGCG CCGGCATCGG CCCGCTGCCG
CTCTATGCCG GCGGCGTCGC CCGCGCCAAC GCCCCGCTGC CGCGCCTGGT GCGGGTGCTG
CCCGAATACG CCACCAGCGG CGAGCCCCTG CATCTGGTCA CGCCCACCGC CCGCTTCATT
CCCAAGCGGG TCCGCCTGCT GATCGACATG CTGACGGAAG CGATCCGCCA CGAGCTGGAC
AGCAGCGATC CGGCATGA
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| Protein sequence | MDLNQLALFV RVVEAGSFTA AAVRLDLPKS SVSRGIAALE QDLNVRLLQR TTRTLHLTDA
GQSLYQVASH ALEEIERATT CAGELQDLPR GKVRMTAPED VGRLLIAPIV ARFMQQYPDI
DLDVVLTPRN VDLVQEGFDL AVRVGRLADS SLVARPLGVL RIGLFASPDY LQKQGVPQAV
RDLSHHNCLD FRGTGRGETQ WRLVGPDGLK TVAVRARLNA DSLSYLETLI ASGAGIGPLP
LYAGGVARAN APLPRLVRVL PEYATSGEPL HLVTPTARFI PKRVRLLIDM LTEAIRHELD
SSDPA
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